Evidence map›Paper›PMID 10770803›Full record

ArticleThe Journal of experimental medicine2000

Evidence for class-specific factors in immunoglobulin isotype switching.

A Shanmugam, M J Shi, L Yauch, J Stavnezer, A L Kenter

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. [Endogenous neddylation in B cells regulates immune responses in mice].Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2026
    Article
  3. Article
  4. Expression of IgA class switching gene in tonsillar mononuclear cells in patients with IgA nephropathy.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2011
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. AID to overcome the limitations of genomic information by introducing somatic DNA alterations.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2006
    Review
  15. Article
  16. Article
  17. Influence of switch region length on immunoglobulin class switch recombination.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  18. Article
  19. Class-switch recombination: after the dawn of AID.Current opinion in immunology · 2003
    Review
  20. Two new isotype-specific switching activities detected for Ig class switching.Journal of immunology (Baltimore, Md. : 1950) · 2002
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

A ShanmugamDepartment of Microbiology and Immunology, University of Illinois College of Medicine, Chicago, Illinois 60612, USA.
M J Shi
L Yauch
J Stavnezer
A L Kenter
Illinois College · USUniversity of Massachusetts Chan Medical School · USUniversity of Illinois Chicago · US

Funding

MOLECULAR BASIS OF IMMUNOGLOBULIN HEAVY CHAIN SWITCHR01AI023283 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI SCHRADER, CAROL E · 1985 to 2014
$5.8M
Class switch recombination during early B cell developmentR21AI106328 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KENTER, AMY L · 2013 to 2014
$424k
IG SWITCH RECOMBINATION IN VIVO AND IN VITROR01GM057078 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KENTER, AMY L. · 1998 to 1999
–
NIAID NIH HHS AI23283NIAID NIH HHS R01 AI023283NIAID NIH HHS R21 AI106328NIGMS NIH HHS GM57078
6 · The paper itself

Abstract

Immunoglobulin class switch recombination (SR) occurs by a B cell-specific, intrachromosomal deletional process between switch regions. We have developed a plasmid-based transient transfection assay for SR to test for the presence of transacting switch activities. The plasmids are novel in that they lack a eukaryotic origin of DNA replication. The recombination activity of these switch substrates is restricted to a subset of B cell lines that support isotype switching on their endogenous loci and to mitogen-activated normal splenic B cells. The factors required for extrachromosomal plasmid recombination are constitutively expressed in proliferating splenic B cells and in B cell lines capable of inducibly undergoing immunoglobulin SR on their chromosomal genes. These studies suggest that mitogens that induce switching on the chromosome induce accessibility rather than switch recombinase activity. Finally, we provide evidence for two distinct switching activities which independently mediate mu-->alpha and mu-->gamma3 SR.

Indexed as

Immunoglobulin Switch RegionAnimalsBase SequenceB-LymphocytesCell LineDNADNA PrimersEscherichia coliImmunoglobulin IsotypesMiceMice, Inbred BALB CMice, NudeMolecular Sequence DataPlasmidsPolymerase Chain ReactionTranscription, GeneticDNADNA PrimersImmunoglobulin Isotypes

Identifiers

PMID10770803
PMCPMC2193137
OpenAlexW2112120618

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.