Evidence map›Paper›PMID 10760245›Full record

ArticleThe Plant cell2000

Arabidopsis RTM2 gene is necessary for specific restriction of tobacco etch virus and encodes an unusual small heat shock-like protein.

S A Whitham, R J Anderberg, S T Chisholm, J C Carrington

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 175 citations in OpenAlex.

  1. Article
  2. Article
  3. Regulatory DNA Sequences Controlling Gene Expression in Leaf Phloem Cells.Methods in molecular biology (Clifton, N.J.) · 2026
    Review
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  6. Orsay virus infection increasesBiology letters · 2024
    Article
  7. Review
  8. Characterization of Local and Systemic Impact of Whitefly (International journal of molecular sciences · 2020
    Article
  9. Natural resistance to Potato virus Y in Solanum tuberosum Group Phureja.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

S A WhithamInstitute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340, USA.
R J Anderberg
S T Chisholm
J C Carrington
Washington State University · US

Funding

Genetic Analysis of RNA Virus-Host InteractionR37AI043288 · NIAID · OREGON STATE UNIVERSITY · PI CARRINGTON, JAMES C · 2008 to 2017
$3.1M
GENETIC ANALYSIS OF RNA VIRUS-HOST INTERACTIONR01AI043288 · NIAID · WASHINGTON STATE UNIVERSITY · PI CARRINGTON, JAMES C · 1998 to 2007
$1.7M
ACTIVITY AND TRANSPORT OF TOBACCO ETCH VIRUS PROTEINASER01AI027832 · NIAID · WASHINGTON STATE UNIVERSITY · PI CARRINGTON, JAMES C · 1994 to 2003
$829k
GENETIC DISSECTION OF VIRAL INFECTION IN ARABIDOPSISF32GM018529 · NIGMS · WASHINGTON STATE UNIVERSITY · PI WHITHAM, STEVEN A · 1996 to 1999
–
GENETIC ANALYSIS OF RNA VIRUS-HOST INTERACTIONR21AI043288 · NIAID · WASHINGTON STATE UNIVERSITY · PI CARRINGTON, JAMES C · 1997 to 1997
–
ACTIVITY AND TRANSPORT OF TOBACCO ETCH VIRUS PROTEINASER29AI027832 · NIAID · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI CARRINGTON, JAMES C · 1989 to 1993
–
NIAID NIH HHS AI27832NIAID NIH HHS AI43288NIAID NIH HHS R01 AI027832NIAID NIH HHS R01 AI043288NIAID NIH HHS R21 AI043288NIAID NIH HHS R37 AI043288NIGMS NIH HHS F32 GM018529NIGMS NIH HHS GM18529
6 · The paper itself

Abstract

Arabidopsis plants have a system to specifically restrict the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance. At least two dominant genes, RTM1 and RTM2, are necessary for this restriction. Through a series of coinfection experiments with heterologous viruses, the RTM1/RTM2-mediated restriction was shown to be highly specific for TEV. The RTM2 gene was isolated by a map-based cloning strategy. Isolation of RTM2 was confirmed by transgenic complementation and sequence analysis of wild-type and mutant alleles. The RTM2 gene product is a multidomain protein containing an N-terminal region with high similarity to plant small heat shock proteins (HSPs). Phylogenetic analysis revealed that the RTM2 small HSP-like domain is evolutionarily distinct from each of the five known classes of plant small HSPs. Unlike most other plant genes encoding small HSPs, expression of the RTM2 gene was not induced by high temperature and did not contribute to thermotolerance of seedlings. The RTM2 gene product was also shown to contain a large C-terminal region with multiple repeating sequences.

Indexed as

Arabidopsis ProteinsAmino Acid SequenceArabidopsisBase SequenceCloning, MolecularGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantGenetic Complementation TestHeat-Shock ProteinsHeat-Shock ResponseLectinsMolecular Sequence DataMutationPeptidesPhenotypeArabidopsis ProteinsHeat-Shock ProteinsLectinsPeptidesPlant LectinsPlant ProteinsRNA, MessengerRTM1 protein, ArabidopsisRTM2 protein, Arabidopsis

Identifiers

PMID10760245
PMCPMC139854
OpenAlexW2126727132

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.