Evidence map›Paper›PMID 10757765›Full record

ArticleGenetics2000

Adaptive evolution of relish, a Drosophila NF-kappaB/IkappaB protein.

D J Begun, P Whitley

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 61 citations in OpenAlex.

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  8. Perspectives on the evolutionary ecology of arthropod antimicrobial peptides.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016
    Review
  9. Evolutionary genetics of insect innate immunity.Briefings in functional genomics · 2015
    Review
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

D J BegunSection of Integrative Biology and Institute for Cellular and Molecular Biology, University of Texas, Austin, Texas 78712, USA. djbegun@mail.utexas.edu
P Whitley
The University of Texas at Austin · US

Funding

POPULATION GENETICS OF D SIMULANS AND D MELANOGASTERR29GM055298 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI BEGUN, DAVID J · 1997 to 2001
$206k
NIGMS NIH HHS GM55298
6 · The paper itself

Abstract

NF-kappaB and IkappaB proteins have central roles in regulation of inflammation and innate immunity in mammals. Homologues of these proteins also play an important role in regulation of the Drosophila immune response. Here we present a molecular population genetic analysis of Relish, a Drosophila NF-kappaB/IkappaB protein, in Drosophila simulans and D. melanogaster. We find strong evidence for adaptive protein evolution in D. simulans, but not in D. melanogaster. The adaptive evolution appears to be restricted to the IkappaB domain. A possible explanation for these results is that Relish is a site of evolutionary conflict between flies and their microbial pathogens.

Indexed as

Drosophila ProteinsEvolution, MolecularAdaptation, BiologicalAnimalsBase SequenceDNA, ComplementaryDrosophilaDrosophila melanogasterFemaleGene SilencingI-kappa B KinaseInsect ProteinsMolecular Sequence DataNF-kappa BPolymorphism, GeneticProtein Serine-Threonine KinasesDNA, ComplementaryDrosophila ProteinsI-kappa B KinaseIKKbeta protein, DrosophilaInsect ProteinsNF-kappa BProtein Serine-Threonine KinasesRel protein, DrosophilaTranscription Factors

Identifiers

PMID10757765
PMCPMC1460974
OpenAlexW2113339577

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.