Evidence map›Paper›PMID 10748231›Full record

ArticleThe Journal of experimental medicine2000

Modulation of the major histocompatibility complex class II-associated peptide repertoire by human histocompatibility leukocyte antigen (HLA)-DO.

M van Ham, M van Lith, B Lillemeier, E Tjin, U Grüneberg, D Rahman, L Pastoors, K van Meijgaarden, C Roucard, J Trowsdale and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 88 citations in OpenAlex.

  1. Development of Human Cell-BasedFrontiers in cellular and infection microbiology · 2022
    Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. HLA-DO Modulates the Diversity of the MHC-II Self-peptidome.Molecular & cellular proteomics : MCP · 2019
    Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Mapping the HLA-DO/HLA-DM complex by FRET and mutagenesis.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

M van HamDivision of Tumor Biology, The Netherlands Cancer Institute, 1066 CX Amsterdam, The Netherlands. vanham@nki.nl
M van Lith
B Lillemeier
E Tjin
U Grüneberg
D Rahman
L Pastoors
K van Meijgaarden
C Roucard
J Trowsdale
T Ottenhoff
D Pappin
J Neefjes
The Netherlands Cancer Institute · NLThe Honourable Society of Lincoln's Inn · GBLeiden University Medical Center · NLUniversity of Cambridge · GBInstitut pour l'avancée des biosciences · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antigen presentation by major histocompatibility complex class II molecules is essential for antibody production and T cell activation. For most class II alleles, peptide binding depends on the catalytic action of human histocompatibility leukocyte antigens (HLA)-DM. HLA-DO is selectively expressed in B cells and impedes the activity of DM, yet its physiological role remains unclear. Cell surface iodination assays and mass spectrometry of major histocompatibility complex class II-eluted peptides show that DO affects the antigenic peptide repertoire of class II. DO generates both quantitative and qualitative differences, and inhibits presentation of large-sized peptides. DO function was investigated under various pH conditions in in vitro peptide exchange assays and in antigen presentation assays using DO(-) and DO(+) transfectant cell lines as antigen-presenting cells, in which effective acidification of the endocytic pathway was prevented with bafilomycin A(1), an inhibitor of vacuolar ATPases. DO effectively inhibits antigen presentation of peptides that are loaded onto class II in endosomal compartments that are not very acidic. Thus, DO appears to be a unique, cell type-specific modulator mastering the class II-mediated immune response induced by B cells. DO may serve to increase the threshold for nonspecific B cell activation, restricting class II-peptide binding to late endosomal compartments, thereby affecting the peptide repertoire.

Indexed as

Antigen PresentationAntigens, Differentiation, B-LymphocyteB-LymphocytesHistocompatibility Antigens Class IIHLA-D AntigensHumansHydrogen-Ion ConcentrationPeptidesRecombinant Fusion ProteinsTumor Cells, CulturedAntigens, Differentiation, B-LymphocyteH2-M antigensH-2O antigenHistocompatibility Antigens Class IIHLA-D AntigensHLA-DM antigensHLA-DO antigensinvariant chainPeptidesRecombinant Fusion Proteins

Identifiers

PMID10748231
PMCPMC2193174
OpenAlexW2154277549

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.