Evidence map›Paper›PMID 10742100›Full record

ArticleNature genetics2000

Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells.

H Niwa, J Miyazaki, A G Smith

Abstract read
PubMed Publisher
In one paragraph

Article in Nature genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1,357 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1,357citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1,357 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  12. Elevated MyoD1 levels expand genome-wide binding and the repertoire of regulated genes.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  17. Multifaceted role ofiScience · 2026
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  20. Article

1,297 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

H NiwaCentre for Genome Research, The University of Edinburgh, King's Buildings, Edinburgh, UK.
J Miyazaki
A G Smith

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cell fate during development is defined by transcription factors that act as molecular switches to activate or repress specific gene expression programmes. The POU transcription factor Oct-3/4 (encoded by Pou5f1) is a candidate regulator in pluripotent and germline cells and is essential for the initial formation of a pluripotent founder cell population in the mammalian embryo. Here we use conditional expression and repression in embryonic stem (ES) cells to determine requirements for Oct-3/4 in the maintenance of developmental potency. Although transcriptional determination has usually been considered as a binary on-off control system, we found that the precise level of Oct-3/4 governs three distinct fates of ES cells. A less than twofold increase in expression causes differentiation into primitive endoderm and mesoderm. In contrast, repression of Oct-3/4 induces loss of pluripotency and dedifferentiation to trophectoderm. Thus a critical amount of Oct-3/4 is required to sustain stem-cell self-renewal, and up- or downregulation induce divergent developmental programmes. Our findings establish a role for Oct-3/4 as a master regulator of pluripotency that controls lineage commitment and illustrate the sophistication of critical transcriptional regulators and the consequent importance of quantitative analyses.

Indexed as

Gene Expression Regulation, DevelopmentalGenes, RegulatorAnimalsCell DifferentiationCell DivisionCell LineCell LineageClone CellsDNA-Binding ProteinsDown-RegulationGenes, ReporterMiceOctamer Transcription Factor-3RNA, MessengerStem CellsTranscription FactorsDNA-Binding ProteinsOctamer Transcription Factor-3Pou5f1 protein, mouseRNA, MessengerTranscription Factors

Identifiers

PMID10742100

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.