Evidence map›Paper›PMID 10716935›Full record

ArticleThe EMBO journal2000

Three conserved members of the RNase D family have unique and overlapping functions in the processing of 5S, 5.8S, U4, U5, RNase MRP and RNase P RNAs in yeast.

A van Hoof, P Lennertz, R Parker

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The EMBO journal, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 183 citations in OpenAlex.

  1. Article
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  3. Human REXO4 is Required for Cell Cycle Progression.bioRxiv : the preprint server for biology · 2025
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  11. The life and times of a tRNA.RNA (New York, N.Y.) · 2023
    Review
  12. Review
  13. Diverse yeast antiviral systems prevent lethal pathogenesis caused by the L-A mycovirus.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Article
  15. Roles of ribosomal RNA in health and disease.Frontiers in RNA research · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

A van HoofDepartment of Molecular Biology, Howard Hughes Medical Institute, University of Arizona, Tucson, AZ 85721, USA. ambro@u.arizona.edu
P Lennertz
R Parker
University of Arizona · US

Funding

Stress Granules in Yeast and MammalsR01GM045443 · NIGMS · UNIVERSITY OF COLORADO · PI PARKER, ROY · 1991 to 2021
$3.3M
mRNA Decapping in YeastR37GM045443 · NIGMS · UNIVERSITY OF COLORADO · PI PARKER, ROY · 2004 to 2013
$3.1M
NIGMS NIH HHS GM45443NIGMS NIH HHS R01 GM045443NIGMS NIH HHS R37 GM045443
6 · The paper itself

Abstract

The biogenesis of a number of RNA species in eukaryotic cells requires 3' processing. To determine the enzymes responsible for these trimming events, we created yeast strains lacking specific 3' to 5' exonucleases. In this work, we describe the analysis of three members of the RNase D family of exonucleases (Rex1p, Rex2p and Rex3p). This work led to three important conclusions. First, each of these exonucleases is required for the processing of distinct RNAs. Specifically, Rex1p, Rex2p and Rex3p are required for 5S rRNA, U4 snRNA and MRP RNA trimming, respectively. Secondly, some 3' exonucleases are redundant with other exonucleases. Specifically, Rex1p and Rex2p function redundantly in 5.8S rRNA maturation, Rex1p, Rex2p and Rex3p are redundant for the processing of U5 snRNA and RNase P RNA, and Rex1p and the exonuclease Rrp6p have an unknown redundant essential function. Thirdly, the demonstration that the Rex proteins can affect reactions that have been attributed previously to the exosome complex indicates that an apparently simple processing step can be surprisingly complex with multiple exonucleases working sequentially in the same pathway.

Indexed as

Saccharomyces cerevisiae ProteinsConserved SequenceEndoribonucleasesGene DeletionGenes, FungalRibonuclease IIIRibonuclease PRibonucleasesRNA, CatalyticRNA, FungalRNA Processing, Post-TranscriptionalRNA, RibosomalRNA, Ribosomal, 5.8SRNA, Ribosomal, 5SRNA, Small NuclearRNA StabilityEndoribonucleasesmitochondrial RNA-processing endoribonucleaseRibonuclease IIIRibonuclease PRibonucleasesRNA, CatalyticRNA, FungalRNA, RibosomalRNA, Ribosomal, 5.8SRNA, Ribosomal, 5SRNA, Small NuclearRNA, Transfer, ArgRNT1 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID10716935
PMCPMC305676
OpenAlexW2120959840

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.