Evidence map›Paper›PMID 10712198›Full record

ArticleAmerican journal of human genetics2000

An unstable trinucleotide-repeat region on chromosome 13 implicated in spinocerebellar ataxia: a common expansion locus.

J B Vincent, M L Neves-Pereira, A D Paterson, E Yamamoto, S V Parikh, F Macciardi, H M Gurling, S G Potkin, C N Pato, A Macedo and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 86 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
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  6. Article
  7. Article
  8. Physio-pathological roles of transglutaminase-catalyzed reactions.World journal of biological chemistry · 2010
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. The spinocerebellar ataxias: order emerges from chaos.Current neurology and neuroscience reports · 2002
    Review
  18. Schizophrenia and genetics: new insights.Current psychiatry reports · 2002
    Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 9 institutions in 5 countries.

J B VincentDepartment of Genetics, Hospital for Sick Children, Toronto, ON M5G 1X8, Canada. jvincent@genet.sickkids.on.ca
M L Neves-Pereira
A D Paterson
E Yamamoto
S V Parikh
F Macciardi
H M Gurling
S G Potkin
C N Pato
A Macedo
M Kovacs
M Davies
J A Lieberman
H Y Meltzer
A Petronis
J L Kennedy
Centre for Addiction and Mental Health · CACase Western Reserve University · USInstitute of Molecular Medicine · INUniversity at Buffalo, State University of New York · USUniversity of California, Irvine · USUniversity of Coimbra · PTUniversity of North Carolina at Chapel Hill · USUniversity of Pittsburgh · USVanderbilt University · US

Funding

SEARCH FOR GENETIC FACTORS IN CHILDHOOD ONSET DEPRESSIONP01MH056193 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KENNEDY, JAMES · 1997 to 2006
$20.3M
CHILDHOOD DEPRESSION-NOSOLOGIC/DEVELOPMENTAL ASPECTSR01MH033990 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KOVACS, MARIA · 1985 to 1989
–
CHILDHOOD DEPRESSION--PSYCHOLOGICAL/DEVELOPMENT ASPECTSR37MH033990 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KOVACS, MARIA · 1989 to 1998
–
NIMH NIH HHS MH33990NIMH NIH HHS P01MH56193
6 · The paper itself

Abstract

Larger CAG/CTG trinucleotide-repeat tracts in individuals affected with schizophrenia (SCZ) and bipolar affective disorder (BPAD) in comparison with control individuals have previously been reported, implying a possible etiological role for trinucleotide repeats in these diseases. Two unstable CAG/CTG repeats, SEF2-1B and ERDA1, have recently been cloned, and studies indicate that the majority of individuals with large repeats as detected by repeat-expansion detection (RED) have large repeat alleles at these loci. These repeats do not show association of large alleles with either BPAD or SCZ. Using RED, we have identified a BPAD individual with a very large CAG/CTG repeat that is not due to expansion at SEF2-1B or ERDA1. From this individual's DNA, we have cloned a highly polymorphic trinucleotide repeat consisting of (CTA)n (CTG)n, which is very long ( approximately 1,800 bp) in this patient. The repeat region localizes to chromosome 13q21, within 1.2 cM of fragile site FRA13C. Repeat alleles in our sample were unstable in 13 (5.6%) of 231 meioses. Large alleles (>100 repeats) were observed in 14 (1. 25%) of 1,120 patients with psychosis, borderline personality disorder, or juvenile-onset depression and in 5 (.7%) of 710 healthy controls. Very large alleles were also detected for Centre d'Etude Polymorphisme Humaine (CEPH) reference family 1334. This triplet expansion has recently been reported to be the cause of spinocerebellar ataxia type 8 (SCA8); however, none of our large alleles above the disease threshold occurred in individuals either affected by SCA or with known family history of SCA. The high frequency of large alleles at this locus is inconsistent with the much rarer occurrence of SCA8. Thus, it seems unlikely that expansion alone causes SCA8; other genetic mechanisms may be necessary to explain SCA8 etiology.

Indexed as

AdultBipolar DisorderBorderline Personality DisorderChristianityChromosomes, Human, Pair 13Cloning, MolecularDepressive DisorderFemaleGene FrequencyGenetic LinkageGenetic TestingHumansMaleMatched-Pair AnalysisMicrosatellite RepeatsMolecular Sequence DataRNA, Messenger

Identifiers

PMID10712198
PMCPMC1288165
OpenAlexW1979736483

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.