Evidence map›Paper›PMID 10710424›Full record

ArticleNucleic acids research2000

Scp160p, a multiple KH-domain protein, is a component of mRNP complexes in yeast.

B D Lang, J L Fridovich-Keil

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Local translation of yeastRNA (New York, N.Y.) · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

B D LangGraduate Program in Biochemistry, Cell and Developmental Biology, Emory University, Atlanta, GA, USA.
J L Fridovich-Keil
Emory University · US

Funding

Training Program in Biochemistry, Cell and Molecular BiologyT32GM008367 · NIGMS · EMORY UNIVERSITY · PI BOISE, LAWRENCE H., CORBETT, ANITA H. · 1990 to 2019
$5.6M
TRANSCRIPTION AND RNA BINDING IN FRAGILE X SYNDROMEP01HD035576 · NICHD · EMORY UNIVERSITY · PI WARREN, STEPHEN T. · 1997 to 2005
$5.0M
NICHD NIH HHS 1P01HD35576-010006NIGMS NIH HHS GM08367NIGMS NIH HHS T32 GM008367
6 · The paper itself

Abstract

Scp160p is a 160 kDa protein in the yeast Saccharomyces cerevisiae that contains 14 repeats of the hnRNP K-homology (KH) domain, and demonstrates significant sequence homology to a family of proteins collectively known as vigilins. As a first step towards defining the function of Scp160p, we have characterized the subcellular distribution and in vivo interactions of this protein. Using sucrose gradient fractionation studies we have demonstrated that Scp160p in cytoplasmic lysates is predominantly associated with polyribosomes. Furthermore, we have found that Scp160p is released from polyribosomes by EDTA in the form of a large complex of> or =1300 kDa that is sensitive both to RNase and NaCl. Using affinity-chromatography to isolate these complexes, we have identified two protein components other than Scp160p: poly(A) binding protein, Pab1p, and Bfr1p. The presence of Pab1p confirms these complexes to be mRNPs. The presence of Bfr1p is intriguing because the null phenotype for this gene is essentially the same as that reported for scp160 -null cells: increased cell size and aberrant DNA content. These results demonstrate that Scp160p associates with polyribosome-bound mRNP complexes in vivo, implicating a role for this protein in one or more levels of mRNA metabolism in yeast.

Indexed as

Saccharomyces cerevisiae ProteinsBase SequenceDNA PrimersEdetic AcidFungal ProteinsGene ExpressionGenes, FungalMacromolecular SubstancesMembrane ProteinsMolecular WeightNuclear ProteinsPoly(A)-Binding ProteinsPolyribosomesProtein Structure, TertiaryRepressor ProteinsRibonucleasesBFR1 protein, S cerevisiaeDNA PrimersEdetic AcidFungal ProteinsMacromolecular SubstancesMembrane Proteinsmessenger ribonucleoproteinNuclear ProteinsPoly(A)-Binding ProteinsRepressor ProteinsRibonucleasesRibonucleoproteinsRNA-Binding ProteinsRNA, FungalRNA, MessengerSaccharomyces cerevisiae ProteinsSCP160 protein, S cerevisiae

Identifiers

PMID10710424
PMCPMC102792
OpenAlexW2146274402

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.