Evidence map›Paper›PMID 10710416›Full record

ArticleNucleic acids research2000

The C-terminal conserved domain of DNA-PKcs, missing in the SCID mouse, is required for kinase activity.

H J Beamish, R Jessberger, E Riballo, A Priestley, T Blunt, B Kysela, P A Jeggo

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
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  4. Review
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  16. Article
  17. Tip60: connecting chromatin to DNA damage signaling.Cell cycle (Georgetown, Tex.) · 2010
    Review
  18. Non-homologous end joining in class switch recombination: the beginning of the end.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2009
    Review
  19. Article
  20. p53 stabilization in response to DNA damage requires Akt/PKB and DNA-PK.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

H J BeamishMRC Cell Mutation Unit, University of Sussex, Brighton BN1 9RR, UK.
R Jessberger
E Riballo
A Priestley
T Blunt
B Kysela
P A Jeggo
University of Sussex · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA-PKcs, the catalytic subunit of DNA-dependent protein kinase (DNA-PK), has a phosphoinositol 3-kinase (PI 3-K) domain close to its C-terminus. Cell lines derived from the SCID mouse have been utilised as a model DNA-PKcs-defective system. The SCID mutation results in truncation of DNA-Pkcs at the extreme C-terminus leaving the PI 3-K domain intact. The mutated protein is expressed at low levels in most SCID cell lines, leaving open the question of whether the mutation abolishes kinase activity. Here, we show that a SCID cell line that expresses the mutant protein normally has dramatically impaired kinase activity. We estimate that the residual kinase activity typically present in SCID fibroblast cell lines is at least two orders of magnitude less than that found in control cells. Our results substantiate evidence that DNA-PKcs kinase activity is required for DSB rejoining and V(D)J recombination and show that the extreme C-terminal region of DNA-PKcs, present in PI 3-K-related protein kinases but absent in bona fide PI 3 lipid kinases, is required for DNA-PKcs to function as a protein kinase. We also show that expression of mutant DNA-PKcs protein confers a growth disadvantage, providing an explanation for the lack of DNA-PKcs expression in most SCID cell lines.

Indexed as

DNA-Binding ProteinsAnimalsBase SequenceB-LymphocytesCell LineCHO CellsChromosomes, Artificial, YeastConserved SequenceCricetinaeDNA-Activated Protein KinaseDNA PrimersDNA RepairHematopoietic Stem CellsMiceMice, SCIDMutagenesis, Site-DirectedDNA-Activated Protein KinaseDNA-Binding ProteinsDNA PrimersPhosphatidylinositol 3-KinasesProtein Serine-Threonine Kinases

Identifiers

PMID10710416
PMCPMC102783
OpenAlexW2168728703

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.