Evidence map›Paper›PMID 10708423›Full record

ArticleJournal of virology2000

Structure and coding content of CST (BART) family RNAs of Epstein-Barr virus.

P R Smith, O de Jesus, D Turner, M Hollyoake, C E Karstegl, B E Griffin, L Karran, Y Wang, S D Hayward, P J Farrell

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 134 citations in OpenAlex.

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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

P R SmithVirology and Cell Biology, Imperial College School of Medicine, London W2 1PG, United Kingdom.
O de Jesus
D Turner
M Hollyoake
C E Karstegl
B E Griffin
L Karran
Y Wang
S D Hayward
P J Farrell
Imperial College London · GBLudwig Cancer Research · BEInstitute of Virology of the Slovak Academy of Sciences · SKJohns Hopkins University · US

Funding

Regulation of replication and latency EBV EBNAsR37CA042245 · NCI · JOHNS HOPKINS UNIVERSITY · PI HAYWARD, S DIANE · 2003 to 2012
$3.6M
REGULATION OF REPLICATION AND LATENCY BY EBV EBNASR01CA042245 · NCI · JOHNS HOPKINS UNIVERSITY · PI HAYWARD, S DIANE · 1986 to 2002
$871k
NCI NIH HHS CA42245NCI NIH HHS R01 CA042245NCI NIH HHS R37 CA042245
6 · The paper itself

Abstract

CST (BART BARF0) family viral RNAs are expressed in several types of Epstein-Barr virus (EBV) infection, including EBV-associated cancers. Many different spliced forms of these RNAs have been described; here we have clarified the structures of some of the more abundant splicing patterns. We report the first cDNAs representing a full-length CST mRNA from a clone library and further characterize the transcription start. The relative abundance of splicing patterns and genomic analysis of the open reading frames (ORFs) suggest that, in addition to the much studied BARF0 ORF, there may be important products made from some of the upstream ORFs in the CST RNAs. Potential biological functions are identified for two of these. The product of the RPMS1 ORF is shown to be a nuclear protein that can bind to the CBF1 component of Notch signal transduction. RPMS1 can inhibit the transcription activation induced through CBF1 by NotchIC or EBNA-2. The protein product of another CST ORF, A73, is shown to be a cytoplasmic protein which can interact with the cell RACK1 protein. Since RACK1 modulates signaling from protein kinase C and Src tyrosine kinases, the results suggest a possible role for CST products in growth control, perhaps consistent with the abundant transcription of CST RNAs in cancers such as nasopharyngeal carcinoma.

Indexed as

Amino Acid SequenceBase SequenceDNA, ComplementaryDNA PrimersGenome, ViralHeLa CellsHerpesvirus 4, HumanHumansMolecular Sequence DataOpen Reading FramesPromoter Regions, GeneticRNA, ViralSequence Homology, Amino AcidSequence Homology, Nucleic AcidViral ProteinsDNA, ComplementaryDNA PrimersRNA, ViralViral Proteins

Identifiers

PMID10708423
PMCPMC111807
OpenAlexW2147550337

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.