Evidence map›Paper›PMID 10691733›Full record

ArticleGenes & development2000

The carboxyl terminus of vertebrate poly(A) polymerase interacts with U2AF 65 to couple 3'-end processing and splicing.

S Vagner, C Vagner, I W Mattaj

Abstract read
In one paragraph

Article in Genes & development, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Coupling of alternative splicing and alternative polyadenylation.Acta biochimica et biophysica Sinica · 2024
    Review
  5. Article
  6. Article
  7. Review
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  9. Article
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  11. Review
  12. Article
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  14. Article
  15. Article
  16. Article
  17. Life and Death of mRNA Molecules inFrontiers in cellular and infection microbiology · 2018
    Review
  18. Article
  19. Review
  20. Review

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

S VagnerEuropean Molecular Biology Laboratory (EMBL), 69117 Heidelberg, Germany.
C Vagner
I W Mattaj

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although it has been established that the processing factors involved in pre-mRNA splicing and 3'-end formation can influence each other positively, the molecular basis of this coupling interaction was not known. Stimulation of pre-mRNA splicing by an adjacent cis-linked cleavage and polyadenylation site in HeLa cell nuclear extract is shown to occur at an early step in splicing, the binding of U2AF 65 to the pyrimidine tract of the intron 3' splice site. The carboxyl terminus of poly(A) polymerase (PAP) previously has been implicated indirectly in the coupling process. We demonstrate that a fusion protein containing the 20 carboxy-terminal amino acids of PAP, when tethered downstream of an intron, increases splicing efficiency and, like the entire 3'-end formation machinery, stimulates U2AF 65 binding to the intron. The carboxy-terminal domain of PAP makes a direct and specific interaction with residues 17-47 of U2AF 65, implicating this interaction in the coupling of splicing and 3'-end formation.

Indexed as

Nuclear Proteins3' Untranslated RegionsAmino Acid SequenceHeLa CellsHumansIntronsMacromolecular SubstancesMolecular Sequence DataNeoplasm ProteinsPolynucleotide AdenylyltransferaseProtein BindingRegulatory Sequences, Nucleic AcidRibonucleoproteinsRibonucleoproteins, Small NuclearRNA, NeoplasmRNA Precursors3' Untranslated RegionsMacromolecular SubstancesNeoplasm ProteinsNuclear ProteinsPolynucleotide AdenylyltransferaseRibonucleoproteinsRibonucleoproteins, Small NuclearRNA, NeoplasmRNA PrecursorsSplicing Factor U2AFU2AF2 protein, human

Identifiers

PMID10691733
PMCPMC316384

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.