Evidence map›Paper›PMID 10678972›Full record

ArticleInfection and immunity2000

Colonic bacteria express an ulcerative colitis pANCA-related protein epitope.

O Cohavy, D Bruckner, L K Gordon, R Misra, B Wei, M E Eggena, S R Targan, J Braun

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
10.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 207 citations in OpenAlex.

  1. Trial
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  8. Vaccines for immune tolerance against autoimmune disease.Advanced drug delivery reviews · 2023
    Review
  9. Article
  10. Review
  11. Review
  12. New Insights on CD8Frontiers in immunology · 2021
    Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

O CohavyDepartment of Pathology, University of California, Los Angeles, California 90095, USA.
D Bruckner
L K Gordon
R Misra
B Wei
M E Eggena
S R Targan
J Braun
Arizona State University · USCedars-Sinai Medical Center · USOphthalmology Associates (United States) · USUniversity of California, Los Angeles · US

Funding

Using polygenic scores to enhance both variant discovery, and understanding of functional consequences of genetic variation in IBD.P01DK046763 · NIDDK · CEDARS-SINAI MEDICAL CENTER · PI TARGAN, STEPHAN R. · 1992 to 2020
$31.1M
CLINICAL AND FUNDAMENTAL IMMUNOLOGYT32AI007126 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SAXON, ANDREW · 1985 to 2006
$1.5M
NCI NIH HHS CA1200NEI NIH HHS EY00360NIAID NIH HHS T32 AI007126NIDDK NIH HHS DK46763NIDDK NIH HHS P01 DK046763
6 · The paper itself

Abstract

Bacteria are a suspected pathogenic factor in inflammatory bowel disease, but the identity of the relevant microbial species remains unresolved. The pANCA autoantibody is associated with most cases of ulcerative colitis (UC) and hence reflects an immune response associated with the disease process. This study addresses the hypothesis that pANCA identifies an antigen(s) expressed by bacteria resident in the human colonic mucosa. Libraries of colonic bacteria were generated using aerobic and anaerobic microbiologic culture conditions, and bacterial pools and clonal isolates were evaluated for cross-reactive antigens by immunoblot analysis using the pANCA monoclonal antibody Fab 5-3. Two major species of proteins immunoreactive to pANCA monoclonal antibodies were detected in bacteria from the anaerobic libraries. Colony isolates of the expressing bacteria were identified as Bacteroides caccae and Escherichia coli. Isolation and partial sequencing of the B. caccae antigen identified a 100-kDa protein without database homologous sequences. The E. coli protein was biochemically and genetically identified as the outer membrane porin OmpC. Enzyme-linked immunosorbent assay with human sera demonstrated elevated immunoglobulin G anti-OmpC in UC patients compared to healthy controls. These findings demonstrate that a pANCA monoclonal antibody detects a recurrent protein epitope expressed by colonic bacteria and implicates colonic bacterial proteins as a target of the disease-associated immune response.

Indexed as

Amino Acid SequenceAntibodies, Antineutrophil CytoplasmicAutoantigensBacterial ProteinsBacteroidesColitis, UlcerativeColonCross ReactionsEpitopesEscherichia coliHumansMolecular Sequence DataMolecular WeightPorinsAntibodies, Antineutrophil CytoplasmicAutoantigensBacterial ProteinsEpitopesOmpC proteinPorins

Identifiers

PMID10678972
PMCPMC97313
OpenAlexW2122089920

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.