Evidence map›Paper›PMID 10675332›Full record

ArticleThe EMBO journal2000

N-acyl homoserine lactone binding to the CarR receptor determines quorum-sensing specificity in Erwinia.

M Welch, D E Todd, N A Whitehead, S J McGowan, B W Bycroft, G P Salmond

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 175 citations in OpenAlex.

  1. Article
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  9. Microbial biofilm as a smart material.Sensors (Basel, Switzerland) · 2015
    Article
  10. Article
  11. Article
  12. LuxR solos in Photorhabdus species.Frontiers in cellular and infection microbiology · 2014
    Article
  13. Article
  14. Article
  15. Kinetic model for signal binding to the Quorum sensing regulator LasR.International journal of molecular sciences · 2013
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

M WelchDepartment of Biochemistry, Tennis Court Road, Cambridge CB2 1QW.
D E Todd
N A Whitehead
S J McGowan
B W Bycroft
G P Salmond
Lawn Tennis Association · GBUniversity of Nottingham · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quorum sensing via an N-acyl homoserine lactone (HSL) pheromone controls the biosynthesis of a carbapenem antibiotic in Erwinia carotovora. Transcription of the carbapenem biosynthetic genes is dependent on the LuxR-type activator protein, CarR. Equilibrium binding of a range of HSL molecules, which are thought to activate CarR to bind to its DNA target sequence, was examined using fluorescence quenching, DNA bandshift analysis, limited proteolysis and reporter gene assays. CarR bound the most physiologically relevant ligand, N-(3-oxohexanoyl)-L-homoserine lactone, with a stoichiometry of two molecules of ligand per dimer of protein and a dissociation constant of 1.8 microM, in good agreement with the concentration of HSL required to activate carbapenem production in vivo. In the presence of HSL, CarR formed a very high molecular weight complex with its target DNA, indicating that the ligand causes the protein to multimerize. Chemical cross-linking analysis supported this interpretation. Our data show that the ability of a given HSL to facilitate CarR binding to its target DNA sequence is directly proportional to the affinity of the HSL for the protein.

Indexed as

Bacterial ProteinsBase SequenceCarbapenemsDNA, BacterialDNA PrimersHomoserineLactonesLigandsPectobacterium carotovorumProtein BindingRepressor ProteinsTrans-ActivatorsTranscription, GeneticBacterial ProteinsCarbapenemsCarR protein, Azospirillum brasilenseDNA, BacterialDNA PrimersHomoserineLactonesLigandsLuxR autoinducer binding proteinsRepressor ProteinsTrans-Activators

Identifiers

PMID10675332
PMCPMC305601
OpenAlexW2144150209

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.