Evidence map›Paper›PMID 10669736›Full record

ArticleMolecular and cellular biology2000

Transient expression of cellular polypyrimidine-tract binding protein stimulates cap-independent translation directed by both picornaviral and flaviviral internal ribosome entry sites In vivo.

R Gosert, K H Chang, R Rijnbrand, M Yi, D V Sangar, S M Lemon

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 129 citations in OpenAlex.

  1. Article
  2. Hepatitis A virus infection.Nature reviews. Disease primers · 2023
    Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Hepatitis C Virus Translation Regulation.International journal of molecular sciences · 2020
    Review
  10. Article
  11. Article
  12. Hepatitis A Virus Genome Organization and Replication Strategy.Cold Spring Harbor perspectives in medicine · 2018
    Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. RNA-binding proteins impacting on internal initiation of translation.International journal of molecular sciences · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

R GosertDepartment of Medicine, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-7030, USA.
K H Chang
R Rijnbrand
M Yi
D V Sangar
S M Lemon
The University of Texas Medical Branch at Galveston · USUniversity of North Carolina at Chapel Hill · US

Funding

Virus-Host Interactions in Hepatitis C Virus (HCV) InfectionsU19AI040035 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI RAY, STUART C · 1996 to 2009
$12.0M
STRUCTURE-FUNCTION RELATIONS IN HIV REPLICATIONR01AI032599 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI LEMON, STANLEY M · 1993 to 2000
$201k
NIAID NIH HHS R01AI32599NIAID NIH HHS U19 AI040035NIAID NIH HHS U19AI40035
6 · The paper itself

Abstract

The regulation of cap-independent translation directed by the internal ribosome entry sites (IRESs) present in some viral and cellular RNAs is poorly understood. Polypyrimidine-tract binding protein (PTB) binds specifically to several viral IRESs. IRES-directed translation may be reduced in cell-free systems that are depleted of PTB and restored by reconstitution of lysates with recombinant PTB. However, there are no data concerning the effects of PTB on IRES-directed translation in vivo. We transfected cells with plasmids expressing dicistronic transcripts in which the upstream cistron encoded PTB or PTB deletion mutants (including a null mutant lacking amino acid residues 87 to 531). The downstream cistron encoded a reporter protein (chloramphenicol acetyltransferase [CAT]) under translational control of the poliovirus IRES which was placed within the intercistronic space. In transfected BS-C-1 cells, transcripts expressing wild-type PTB produced 12-fold more reporter protein than similar transcripts encoding the PTB null mutant. There was a 2.4-fold difference in CAT produced from these transcripts in HeLa cells, which contain a greater natural abundance of PTB. PTB similarly stimulated CAT production from transcripts containing the IRES of hepatitis A virus or hepatitis C virus in BS-C-1 cells and Huh-7 cells (37- to 44-fold increase and 5 to 5.3-fold increase, respectively). Since PTB had no quantitative or qualitative effect on transcription from these plasmids, we conclude that PTB stimulates translation of representative picornaviral and flaviviral RNAs in vivo. This is likely to reflect the stabilization of higher ordered RNA structures within the IRES and was not observed with PTB mutants lacking RNA recognition motifs located in the C-terminal third of the molecule.

Indexed as

Protein BiosynthesisChloramphenicol O-AcetyltransferaseFlavivirusHeLa CellsHumansPicornaviridaePolypyrimidine Tract-Binding ProteinRibonucleoproteinsRibosomesRNA-Binding ProteinsRNA, ViralTransfectionChloramphenicol O-AcetyltransferasePolypyrimidine Tract-Binding ProteinRibonucleoproteinsRNA-Binding ProteinsRNA, Viral

Identifiers

PMID10669736
PMCPMC85342
OpenAlexW2107500874

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.