Evidence map›Paper›PMID 10666245›Full record

ArticleJournal of virology2000

Sint1, a common integration site in SL3-3-induced T-cell lymphomas, harbors a putative proto-oncogene with homology to the septin gene family.

A B Sørensen, A H Lund, S Ethelberg, N G Copeland, N A Jenkins, F S Pedersen

Abstract read
In one paragraph

Article in Journal of virology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 43 citations in OpenAlex.

  1. The Roles of Septins in Regulating Fission Yeast Cytokinesis.Journal of fungi (Basel, Switzerland) · 2024
    Review
  2. Article
  3. Structure and function of Septin 9 and its role in human malignant tumors.World journal of gastrointestinal oncology · 2020
    Review
  4. Septin Mutations in Human Cancers.Frontiers in cell and developmental biology · 2016
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Characterization of a SEPT9 interacting protein, SEPT14, a novel testis-specific septin.Mammalian genome : official journal of the International Mammalian Genome Society · 2007
    Article
  11. Activation of an oncogenic microRNA cistron by provirus integration.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  12. Do septins have a role in cancer?British journal of cancer · 2005
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 4 countries.

A B SørensenDepartment of Molecular and Structural Biology, University of Aarhus, DK-8000 Aarhus C, Denmark.
A H Lund
S Ethelberg
N G Copeland
N A Jenkins
F S Pedersen
Institute of Structural and Molecular Biology · GBCancer Research Center · USAarhus University · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The murine retrovirus SL3-3 is a potent inducer of T-cell lymphomas when inoculated into susceptible newborn mice. Previously, DNAs from twenty SL3-3-induced tumors were screened by PCR for provirus integration sites. Two out of 20 tumors demonstrated clonal provirus insertion into a common region. This region has now been isolated and characterized. The region, named SL3-3 integration site 1 (Sint1), maps to the distal end of mouse chromosome 11, corresponding to human chromosome 17q25, and may be identical to a mouse mammary tumor virus integration site in a T-cell lymphoma, Pad3. Two overlapping genomic lambda clones spanning about 35 kb were isolated and used as a starting point for a search for genes in the neighborhood of the virus integration sites. A genomic fragment was used as a hybridization probe to isolate a 3-kb cDNA clone, the expression of which was upregulated in one of two tumors harboring a provirus in Sint1. The cDNA clone is predicted to encode a protein which shows 97.0% identity to a human septin-like protein encoded by a gene which has been found as a fusion partner gene of MLL in an acute myeloid leukemia with a t(11;17)(q23;q25). Together these findings raise the possibility that a proto-oncogene belonging to the septin family, and located about 15 kb upstream of the provirus integration sites, is involved in murine leukemia virus-induced T-cell lymphomagenesis.

Indexed as

Genes, SyntheticVirus IntegrationAmino Acid SequenceAnimalsBase SequenceCell LineChromosome MappingConsensus SequenceDNA-Binding ProteinsDNA, ComplementaryDNA, NeoplasmFemaleHumansLeukemia Virus, MurineLymphoma, T-CellMaleDNA-Binding ProteinsDNA, ComplementaryDNA, NeoplasmMAS1 protein, humanProto-Oncogene MasRNA-Binding ProteinsRNA, Neoplasmsint1 protein, synthetic

Identifiers

PMID10666245
PMCPMC111696
OpenAlexW2089865002

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.