Evidence map›Paper›PMID 10655336›Full record

ArticleJournal of clinical microbiology2000

Species identification of Mycobacterium avium complex isolates by a variety of molecular techniques.

M L Beggs, R Stevanova, K D Eisenach

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Mycobacterium avium Complex Disease.Microbiology spectrum · 2017
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Mycobacterium avium in the postgenomic era.Clinical microbiology reviews · 2007
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

M L BeggsDepartments of Pathology, University of Arkansas for Medical Sciences, Little Rock, AR, USA. BeggsMarjorieL@exchange.uams.edu
R Stevanova
K D Eisenach
AnatomyWorks (United States) · USJohn L. McClellan Memorial Veterans Hospital · US

Funding

NIAMS NIH HHS PAR-96012
6 · The paper itself

Abstract

Organisms in the Mycobacterium avium complex (MAC; M. avium, M. intracellulare, and "nonspecific or X" MAC) are emerging pathogens among individual organisms of which significant genetic variability is displayed. The objective of the present study was to evaluate various molecular methods for the rapid and definitive identification of MAC species. Isolates were obtained from both human immunodeficiency virus (HIV)-positive patients and HIV-negative patients with and without known predisposing conditions. The isolates were initially hybridized with nucleic acid probes complementary to the rRNA of the respective mycobacterial species (AccuProbe Culture Confirmation kits for M. avium, M. intracellulare, and MAC species; Gen-Probe). Isolates were also examined by PCR and in some cases by Southern blot hybridization for the insertion element IS1245. Two other techniques included a PCR assay that amplifies the mig gene, a putative virulence factor for MAC, and hsp65 gene amplification and sequencing. This study led to the following observations. Eighty-five percent of the isolates from HIV-positive patients were M. avium and 86% of the isolates from HIV-negative patients were M. intracellulare. Fifteen of the M. avium isolates did not contain IS1245 and 7% of the M. intracellulare isolates were found to carry IS1245. All of the M. avium strains were mig positive, and all of the M. intracellulare strains were mig negative.

Indexed as

AIDS-Related Opportunistic InfectionsBacterial ProteinsBacterial Typing TechniquesChaperonin 60ChaperoninsDNA, BacterialDNA FingerprintingDNA Transposable ElementsElectrophoresis, Gel, Pulsed-FieldHumansMycobacterium avium ComplexMycobacterium avium-intracellulare InfectionPolymerase Chain ReactionRNA, Ribosomal, 16SSequence Analysis, DNAVirulenceBacterial ProteinsChaperonin 60ChaperoninsDNA, BacterialDNA Transposable Elementsheat-shock protein 65, MycobacteriumRNA, Ribosomal, 16S

Identifiers

PMID10655336
PMCPMC86135
OpenAlexW2163764253

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.