Evidence map›Paper›PMID 10644378›Full record

ArticleJournal of virology2000

Pathogenic conversion of live attenuated simian immunodeficiency virus vaccines is associated with expression of truncated Nef.

E T Sawai, M S Hamza, M Ye, K E Shaw, P A Luciw

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 81 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. The design and evaluation of HIV-1 vaccines.AIDS (London, England) · 2012
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

E T SawaiDepartment of Medical Pathology, University of California, Davis, California 95616, USA.
M S Hamza
M Ye
K E Shaw
P A Luciw
University of California, Davis · US

Funding

ZONA PELLUCIDA PEPTIDES AS IMMUNOCONTRACEPTIVE ANTIGENSP51RR000169 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI HYDE, DALLAS MELVIN · 1985 to 2011
$126.2M
NEF AND HIV AND SIV MOLECULAR PATHOGENESISR29AI038718 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI SAWAI, EARL T · 1995 to 1999
–
NCRR NIH HHS P51 RR000169NCRR NIH HHS RR-00169NIAID NIH HHS R01-AI38523NIAID NIH HHS R29-AI38718
6 · The paper itself

Abstract

Rhesus macaques infected with simian immunodeficiency virus (SIV) containing either a large nef deletion (SIVmac239Delta(152)nef) or interleukin-2 in place of nef developed high virus loads and progressed to simian AIDS. Viruses recovered from both juvenile and neonatal macaques with disease produced a novel truncated Nef protein, tNef. Viruses recovered from juvenile macaques infected with serially passaged virus expressing tNef exhibited a pathogenic phenotype. These findings demonstrated strong selective pressure to restore expression of a truncated Nef protein, and this reversion was linked to increased pathogenic potential in live attenuated SIV vaccines.

Indexed as

Amino Acid SequenceAnimalsGene Products, nefGenetic VectorsInterleukin-2Macaca mulattaMolecular Sequence DataMutagenesisSAIDS VaccinesSequence Analysis, DNASimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusVaccines, AttenuatedGene Products, nefInterleukin-2SAIDS VaccinesVaccines, Attenuated

Identifiers

PMID10644378
PMCPMC111683
OpenAlexW2130285456

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.