Evidence map›Paper›PMID 10628999›Full record

ArticleGenetics2000

Sequence and structural diversity of the S locus genes from different lines with the same self-recognition specificities in Brassica oleracea.

M Kusaba, M Matsushita, K Okazaki, Y Satta, T Nishio

Abstract read
In one paragraph

Article in Genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 42 citations in OpenAlex.

  1. Characterization of self-incompatibility genes inFrontiers in plant science · 2026
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  2. Breeding science · 2023
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  11. Specificity determinants and diversification of the Brassica self-incompatibility pollen ligand.Proceedings of the National Academy of Sciences of the United States of America · 2004
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

M KusabaInstitute of Radiation Breeding, National Institute of Agrobiological Resources, Ministry of Agriculture, Forestry and Fisheries, Ohmiya-machi, Naka-gun, Ibaraki, 319-2293, Japan. kusaba@irb.affrc.go.jp
M Matsushita
K Okazaki
Y Satta
T Nishio
Institute of Agrobiological Sciences · JPMinistry of Agriculture, Forestry and Fisheries · JPThe Graduate University for Advanced Studies, SOKENDAI · JPTohoku University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Self-incompatibility (SI) is a mechanism for preventing self-fertilization in flowering plants. In Brassica, it is controlled by a single multi-allelic locus, S, and it is believed that two highly polymorphic genes in the S locus, SLG and SRK, play central roles in self-recognition in stigmas. SRK is a putative receptor protein kinase, whose extracellular domain exhibits high similarity to SLG. We analyzed two pairs of lines showing cross-incompatibility (S(2) and S(2-b); S(13) and S(13-b)). In S(2) and S(2-b), SRKs were more highly conserved than SLGs. This was also the case with S(13) and S(13-b). This suggests that the SRKs of different lines must be conserved for the lines to have the same self-recognition specificity. In particular, SLG(2-b) showed only 88. 5% identity to SLG(2), which is comparable to that between the SLGs of different S haplotypes, while SRK(2-b) showed 97.3% identity to SRK(2) in the S domain. These findings suggest that the SLGs in these S haplotypes are not important for self-recognition in SI.

Indexed as

Amino Acid SequenceBase SequenceBrassicaCloning, MolecularDNA, ComplementaryDNA PrimersGlycoproteinsHaplotypesMolecular Sequence DataPlant ProteinsSequence Homology, Amino AcidDNA, ComplementaryDNA PrimersGlycoproteinsPlant Proteinsself-incompatibility locus specific glycoprotein, Brassica

Identifiers

PMID10628999
PMCPMC1460907
OpenAlexW2115182074

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.