Evidence map›Paper›PMID 10627531›Full record

ArticleJournal of virology2000

Normal T-cell turnover in sooty mangabeys harboring active simian immunodeficiency virus infection.

L A Chakrabarti, S R Lewin, L Zhang, A Gettie, A Luckay, L N Martin, E Skulsky, D D Ho, C Cheng-Mayer, P A Marx

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of virology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed, 1 pooled it
4.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 1 synthesis or guideline pooled it, 196 citations in OpenAlex.

  1. The Hitchhiker Guide to CD4Frontiers in immunology · 2021
    Pooled it
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  18. Quantifying T lymphocyte turnover.Journal of theoretical biology · 2013
    Article
  19. Article
  20. Review

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

L A ChakrabartiAaron Diamond AIDS Research Center, The Rockefeller University, New York, New York 10016, USA. chakra@adarc.org
S R Lewin
L Zhang
A Gettie
A Luckay
L N Martin
E Skulsky
D D Ho
C Cheng-Mayer
P A Marx
Aaron Diamond AIDS Research Center · USRockefeller University · USTulane Medical Center · USTulane University · US

Funding

YNPRC NHP CLINICAL MEDICINE RESIDENCY PROGRAM - SUPPLEMENTP51RR000165 · NCRR · EMORY UNIVERSITY · PI ALTMAN, JOHN DAVID · 1985 to 2011
$114.0M
ZCM:A NOVEL BROAD-SPECTRUM MICROBICIDE FOR SEXUALLY TRANSMITTED INFECTIONSP51RR000164 · NCRR · TULANE UNIVERSITY OF LOUISIANA · PI VEAZEY, RONALD S. · 1985 to 2011
$100.1M
CORE--VIROLOGYP30AI042848 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HO, DAVID D · 1998 to 2002
$4.3M
Betulinic acid derivatives as anti-HIV agents.R01AI065310 · NIAID · DUKE UNIVERSITY · PI CHEN, CHIN-HO · 2006 to 2014
$3.1M
HIV1/SIV DYNAMICS AND LYMPHOCYTE TURNOVERR01AI040387 · NIAID · AARON DIAMOND AIDS RESEARCH CENTER · PI HO, DAVID D · 1996 to 2000
$519k
PHENOTYPIC AND GENETIC DETERMINANTS OF SHIV PATHOGENESISR01AI041945 · NIAID · AARON DIAMOND AIDS RESEARCH CENTER · PI CHENG-MAYER, CECILIA C · 1997 to 2000
$304k
EARLY EVENTS IN MUCOSAL TRANSMISSION OF SIV AND SHIVR01AI038573 · NIAID · AARON DIAMOND AIDS RESEARCH CENTER · PI MARX, PRESTON A · 1995 to 1998
–
NCRR NIH HHS P51 RR000164NCRR NIH HHS P51 RR000165NIAID NIH HHS P30 AI042848NIAID NIH HHS R01 AI041945NIAID NIH HHS R01 AI065310NIAID NIH HHS R01 AI38573NIAID NIH HHS R01 AI40387NIAID NIH HHS R01 AI41945
6 · The paper itself

Abstract

Sooty mangabeys naturally infected with simian immunodeficiency virus (SIV) remain healthy though they harbor viral loads comparable to those in rhesus macaques that progress to AIDS. To assess the immunologic basis of disease resistance in mangabeys, we compared the effect of SIV infection on T-cell regeneration in both monkey species. Measurement of the proliferation marker Ki-67 by flow cytometry showed that mangabeys harbored proliferating T cells at a level of 3 to 4% in peripheral blood irrespective of their infection status. In contrast, rhesus macaques demonstrated a naturally high fraction of proliferating T cells (7%) that increased two- to threefold following SIV infection. Ki-67(+) T cells were predominantly CD45RA(-), indicating increased proliferation of memory cells in macaques. Quantitation of an episomal DNA product of T-cell receptor alpha rearrangement (termed alpha1 circle) showed that the concentration of recent thymic emigrants in blood decreased with age over a 2-log unit range in both monkey species, consistent with age-related thymic involution. SIV infection caused a limited decrease of alpha1 circle numbers in mangabeys as well as in macaques. Dilution of alpha1 circles by T-cell proliferation likely contributed to this decrease, since alpha1 circle numbers and Ki-67(+) fractions correlated negatively. These findings are compatible with immune exhaustion mediated by abnormal T-cell proliferation, rather than with early thymic failure, in SIV-infected macaques. Normal T-cell turnover in SIV-infected mangabeys provides an explanation for the long-term maintenance of a functional immune system in these hosts.

Indexed as

CercocebusLymphocyte ActivationAgingAnimalsCD4 Lymphocyte CountCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesGene Rearrangement, alpha-Chain T-Cell Antigen ReceptorImmunity, InnateImmunologic MemoryKi-67 AntigenMacaca mulattaMolecular Sequence DataRNA, ViralSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusKi-67 AntigenRNA, Viral

Identifiers

PMID10627531
PMCPMC111455
OpenAlexW2161633487

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.