Evidence map›Paper›PMID 10618370›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2000

Signal recognition particle components in the nucleolus.

J C Politz, S Yarovoi, S M Kilroy, K Gowda, C Zwieb, T Pederson

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 187 citations in OpenAlex.

  1. Article
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  7. Emergent microenvironments of nucleoli.Nucleus (Austin, Tex.) · 2024
    Review
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  15. Review
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  19. Article
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37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

J C PolitzDepartment of Biochemistry, University of Massachusetts Medical School, 377 Plantation Street, Suite 337, Worcester, MA 01605, USA.
S Yarovoi
S M Kilroy
K Gowda
C Zwieb
T Pederson
The University of Texas Health Science Center at Tyler · USUniversity of Massachusetts Chan Medical School · US

Funding

STRUCTURE/FUNCTION OF SRP RNAR01GM049034 · NIGMS · UNIVERSITY OF TEXAS HLTH CTR AT TYLER · PI ZWIEB, CHRISTIAN WOLFGANG · 1995 to 2006
$1.2M
RNA PROCESSING AND RIBONUCLEOPROTEINR01GM021595 · NIGMS · WORCESTER FOUNDATION FOR BIOMEDICAL RES · PI PEDERSON, THORU · 1985 to 2001
$886k
MRNAS IN LIVE MUSCLE CELLS USING ANTISENSE DNAF32AR008361 · NIAMS · WORCESTER FOUNDATION FOR BIOMEDICAL RES · PI RITLAND, JOAN C. POLITZ · 1995 to 1999
–
NIAMS NIH HHS AR-08361NIAMS NIH HHS F32 AR008361NIGMS NIH HHS GM-21595-23NIGMS NIH HHS GM-49034NIGMS NIH HHS R01 GM049034
6 · The paper itself

Abstract

The signal recognition particle (SRP) is a ribonucleoprotein composed of an Alu domain and an S domain. The S domain contains unique sequence SRP RNA and four SRP proteins: SRP19, SRP54, SRP68, and SRP72. SRP interacts with ribosomes to bring translating membrane and secreted proteins to the endoplasmic reticulum (ER) for proper processing. Additionally, SRP RNA is a member of a family of small nonribosomal RNAs found recently in the nucleolus, suggesting that the nucleolus is more plurifunctional than previously realized. It was therefore of interest to determine whether other SRP components localize to this intranuclear site. In transfected rat fibroblasts, green fluorescent protein fusions of SRP19, SRP68, and SRP72 localized to the nucleolus, as well as to the cytoplasm, as expected. SRP68 also accumulated in the ER, consistent with its affinity for the ER-bound SRP receptor. SRP54 was detected in the cytoplasm as a green fluorescent protein fusion and in immunofluorescence studies, but was not detected in the nucleolus. In situ hybridization experiments also revealed endogenous SRP RNA in the nucleolus. These results demonstrate that SRP RNA and three SRP proteins visit the nucleolus, suggesting that partial SRP assembly, or another unidentified activity of the SRP components, occurs at the nucleolus. SRP54 apparently interacts with nascent SRP beyond the nucleolus, consistent with in vitro reconstitution experiments showing that SRP19 must bind to SRP RNA before SRP54 binds. Our findings support the notion that the nucleolus is the site of assembly and/or interaction between the family of ribonucleoproteins involved in protein synthesis, in addition to ribosomes themselves.

Indexed as

Saccharomyces cerevisiae ProteinsAnimalsCell LineCell NucleolusEndoplasmic ReticulumFluorescent Antibody TechniqueGreen Fluorescent ProteinsHumansIn Situ HybridizationLuminescent ProteinsMolecular Sequence DataRatsRecombinant Fusion ProteinsRNA, NuclearSignal Recognition ParticleTransfectionGreen Fluorescent ProteinsLuminescent ProteinsRecombinant Fusion ProteinsRNA, NuclearSaccharomyces cerevisiae ProteinsSignal Recognition ParticleSRP19 protein, humanSRP54 protein, S cerevisiaeSRP68 protein, S cerevisiaeSRP72 protein, humanSRP72 protein, S cerevisiae

Identifiers

PMID10618370
PMCPMC26615
OpenAlexW2055099935

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.