Evidence map›Paper›PMID 10611242›Full record

ArticleMolecular and cellular biology2000

Inhibition of TATA-binding protein function by SAGA subunits Spt3 and Spt8 at Gcn4-activated promoters.

R Belotserkovskaya, D E Sterner, M Deng, M H Sayre, P M Lieberman, S L Berger

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 129 citations in OpenAlex.

  1. Article
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  6. SAGA Complex Subunits inFrontiers in cellular and infection microbiology · 2022
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  7. The biochemical and genetic discovery of the SAGA complex.Biochimica et biophysica acta. Gene regulatory mechanisms · 2021
    Review
  8. Review
  9. Review
  10. Article
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  12. A-to-I mRNA editing in fungi: occurrence, function, and evolution.Cellular and molecular life sciences : CMLS · 2019
    Review
  13. A Potential Antifungal Effect of Chitosan AgainstFrontiers in microbiology · 2019
    Article
  14. Article
  15. The Pseudokinase Domain ofG3 (Bethesda, Md.) · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

R BelotserkovskayaThe Wistar Institute, Philadelphia, Pennsylvania 19104, USA.
D E Sterner
M Deng
M H Sayre
P M Lieberman
S L Berger
The Wistar Institute · USJohns Hopkins University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SAGA is a 1.8-MDa yeast protein complex that is composed of several distinct classes of transcription-related factors, including the adaptor/acetyltransferase Gcn5, Spt proteins, and a subset of TBP-associated factors. Our results indicate that mutations that completely disrupt SAGA (deletions of SPT7 or SPT20) strongly reduce transcriptional activation at the HIS3 and TRP3 genes and that Gcn5 is required for normal HIS3 transcriptional start site selection. Surprisingly, mutations in Spt proteins involved in the SAGA-TBP interaction (Spt3 and Spt8) cause derepression of HIS3 and TRP3 transcription in the uninduced state. Consistent with this finding, wild-type SAGA inhibits TBP binding to the HIS3 promoter in vitro, while SAGA lacking Spt3 or Spt8 is not inhibitory. We detected two distinct forms of SAGA in cell extracts and, strikingly, one lacks Spt8. Conditions that induce HIS3 and TRP3 transcription result in an altered balance between these complexes strongly in favor of the form without Spt8. These results suggest that the composition of SAGA may be dynamic in vivo and may be regulated through dissociable inhibitory subunits.

Indexed as

Saccharomyces cerevisiae ProteinsAcetyltransferasesAnthranilate SynthaseDNA-Binding ProteinsDNA FootprintingDNA, FungalFungal ProteinsGene DeletionGene Expression Regulation, FungalGenes, FungalHistone AcetyltransferasesHydro-LyasesIndole-3-Glycerol-Phosphate SynthaseModels, GeneticMultienzyme Complexesp300-CBP-Associated FactorAcetyltransferasesAnthranilate SynthaseDNA-Binding ProteinsDNA, FungalFungal ProteinsGCN5 protein, S cerevisiaeHistone AcetyltransferasesHydro-Lyasesimidazoleglycerolphosphate dehydrataseIndole-3-Glycerol-Phosphate SynthaseMultienzyme Complexesp300-CBP-Associated FactorProtein KinasesRepressor ProteinsSaccharomyces cerevisiae ProteinsSPT3 protein, S cerevisiaeSPT8 protein, S cerevisiaeTATA-Box Binding ProteinTrans-ActivatorsTranscription FactorsTRP3 protein, S cerevisiae

Identifiers

PMID10611242
PMCPMC85153
OpenAlexW2154689716

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.