Evidence map›Paper›PMID 10608776›Full record

ArticleThe Journal of infectious diseases2000

Quasispecies development of Helicobacter pylori observed in paired isolates obtained years apart from the same host.

E J Kuipers, D A Israel, J G Kusters, M M Gerrits, J Weel, A van Der Ende, R W van Der Hulst, H P Wirth, J Höök-Nikanne, S A Thompson and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
15.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 178 citations in OpenAlex.

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  13. mBio · 2020
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  15. Article
  16. Review
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  19. PeerJ · 2018
    Article
  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

E J KuipersDivision of Infectious Diseases, Vanderbilt University School of Medicine and VA Medical Center, Nashville, Tennessee, USA. kuipers@azvu.nl
D A Israel
J G Kusters
M M Gerrits
J Weel
A van Der Ende
R W van Der Hulst
H P Wirth
J Höök-Nikanne
S A Thompson
M J Blaser
Vanderbilt University Medical Center · USAcademic Medical Center · NLUniversity of Amsterdam · NL

Funding

H PYLORI RECOMBINATION AND GASTRIC COLONIZATIONR01DK053707 · NIDDK · VANDERBILT UNIVERSITY · PI BLASER, MARTIN J · 1997 to 2001
$475k
CAMPYLOBACTER FETUS SURFACE LAYER PROTEIN SECRETIONR29AI043548 · NIAID · VANDERBILT UNIVERSITY · PI THOMPSON, STUART A · 1998 to 2002
$316k
NIAID NIH HHS R29 AI043548NIDDK NIH HHS DK-53707
6 · The paper itself

Abstract

Helicobacter pylori isolates show greater genetic diversity than other bacterial species studied, but the basis for this phenomenon is unknown. Whether detectable genomic mutation appears within an H. pylori population during persistent colonization was investigated. Paired H. pylori populations obtained across 7- to 10-year intervals from 13 patients were characterized by use of methods including polymerase chain reaction (PCR) genotyping for cagA, vacA, iceA, recA, and IS605; random arbitrarily primed DNA (RAPD)-PCR and amplified fragment length polymorphism (AFLP) analysis; and ELISA, to determine Lewis phenotypes. Genotyping, including recA sequence analysis, revealed that initial and follow-up populations represented the same population in 11 patients (85%). Nevertheless, distinct dissimilarities were shown within each of these 11 pairs by both RAPD-PCR and AFLP analyses. During follow-up, Lewis-y levels, but not Lewis-x levels, decreased significantly. The changes detected by RAPD-PCR and AFLP indicate that genetic drift occurs within H. pylori populations over the course of years of colonization of a single host.

Indexed as

Antigens, BacterialAdultAgedAged, 80 and overBacterial Outer Membrane ProteinsBacterial ProteinsDNA Transposable ElementsEvolution, MolecularFemaleGenetic VariationGenome, BacterialGenotypeHelicobacter InfectionsHelicobacter pyloriHumansMaleAntigens, BacterialBacterial Outer Membrane ProteinsBacterial ProteinscagA protein, Helicobacter pyloriDNA Transposable Elementsice nucleation proteinVacA protein, Helicobacter pylori

Identifiers

PMID10608776
PMCPMC2766531
OpenAlexW2146087394

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.