Evidence map›Paper›PMID 10597227›Full record

ArticleOncogene1999

Silencing of metallothionein-I gene in mouse lymphosarcoma cells by methylation.

S Majumder, K Ghoshal, Z Li, Y Bo, S T Jacob

Open access · greenAbstract read
In one paragraph

Article in Oncogene, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. CpG Site-Specific Regulation of Metallothionein-1 Gene Expression.International journal of molecular sciences · 2020
    Article
  3. Article
  4. Review
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  6. Article
  7. Article
  8. Article
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  11. Methylation and silencing of protein tyrosine phosphatase receptor type O in chronic lymphocytic leukemia.Clinical cancer research : an official journal of the American Association for Cancer Research · 2007
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

S MajumderDepartment of Medical Biochemistry, College of Medicine, Ohio State University, Columbus 43210, USA.
K Ghoshal
Z Li
Y Bo
S T Jacob
The Ohio State University · US

Funding

ROLE OF METALLOTHIONEIN IN CANCER AND DRUG RESISTANCER01CA061321 · NCI · ROSALIND FRANKLIN UNIV OF MEDICINE &SCI · PI JACOB, SAMSON T · 1994 to 1998
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NCI NIH HHS CA61321NCI NIH HHS R01 CA061321
6 · The paper itself

Abstract

Metallothionein-I (MT-I) gene is silenced by methylation of CpG islands in mouse lymphosarcoma P1798 cells but not in the thymus, the cell type from which the tumor was derived. Bisulfite genomic sequencing revealed that all 21 CpG dinucleotides present within -216 bp to +1 bp with respect to transcription start site are methylated in the tumor cell line, but none is methylated in the thymus. The lymphosarcoma cells induced MT-I in response to heavy metals only after demethylation with 5-azacytidine (5-AsaC). The electrophoretic mobility shift assay using specific oligonucleotide probes showed that the key transcription factors regulating MT-I gene (e.g., MTF-1, Sp 1 and MLTF/USF) are active in P1798 cells. In vivo footprinting of the proximal promoter region showed that none of the metal regulatory elements (MREs) or MLTF/USF are occupied in response to heavy metals. Demethylation of the lymphosarcoma cells with 5-AzaC resulted in constitutive footprinting at MLTF/ARE, and zinc-inducible footprinting at MRE-c, MRE-d and MRE-e sites. Demethylation of just 10-20% of the CpG islands was sufficient to render the gene inducible by cadmium or zinc. The MT-I induction persisted in the cancer cells for several generations even after withdrawal of 5-AzaC from the culture medium.

Indexed as

Gene Expression Regulation, NeoplasticGene SilencingAnimalsAntimetabolites, AntineoplasticAzacitidineBase SequenceCpG IslandsDNA FootprintingDNA MethylationDNA, NeoplasmLymphoma, Non-HodgkinMetallothioneinMetals, HeavyMiceMolecular Sequence DataNeoplasm ProteinsAntimetabolites, AntineoplasticAzacitidineDNA, NeoplasmMetallothioneinMetals, HeavyNeoplasm ProteinsTranscription Factors

Identifiers

PMID10597227
PMCPMC2237891
OpenAlexW2015772752

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.