Evidence map›Paper›PMID 10594020›Full record

ArticleMolecular and cellular biology2000

Pre-mRNA splicing by the essential Drosophila protein B52: tissue and target specificity.

B E Hoffman, J T Lis

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

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  6. DX16 is a novel SR protein phosphorylated by DOA.Molecular and cellular biochemistry · 2008
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

B E HoffmanDepartment of Molecular Biology, Cornell University, Ithaca, New York 14853, USA.
J T Lis
Cornell University · US

Funding

FUNCTIONAL ROLES OF SR PROTEIN B52--AN IN VIVO ANALYSISF32GM017509 · NIGMS · CORNELL UNIVERSITY ITHACA · PI HOFFMAN, BRYAN E · 1996 to 1997
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NIGMS NIH HHS 5F32 GM17509NIGMS NIH HHS F32 GM017509NIGMS NIH HHS GM40918
6 · The paper itself

Abstract

B52, an essential SR protein of Drosophila melanogaster, stimulates pre-mRNA splicing in splicing-deficient mammalian S100 extracts. Surprisingly, mutant larvae depleted of B52 were found to be capable of splicing at least several pre-mRNAs tested (H. Z. Ring and J. T. Lis, Mol. Cell. Biol. 14:7499-7506, 1994). In a homologous in vitro system, we demonstrated that B52 complements a Drosophila S100 extract to allow splicing of a Drosophila fushi tarazu (ftz) mini-pre-mRNA. Moreover, Kc cell nuclear extracts that were immunodepleted of B52 lost their ability to splice this ftz pre-mRNA. In contrast, splicing of this same ftz pre-mRNA occurred in whole larvae homozygous for the B52 deletion. Other SR protein family members isolated from these larvae could substitute for B52 splicing activity in vitro. We also observed that SR proteins are expressed variably in different larval tissues. B52 is the predominant SR protein in specific tissues, including the brain. Tissues in which B52 is normally the major SR protein, such as larval brain tissue, failed to produce ftz mRNA in the B52 deletion line. These observations support a model in which the lethality of the B52 deletion strain is a consequence of splicing defects in tissues in which B52 is normally the major SR protein.

Indexed as

Drosophila ProteinsRNA SplicingAnimalsDrosophila melanogasterGene Expression RegulationMutationNuclear ProteinsOrgan SpecificityPhosphoproteinsRNA-Binding ProteinsRNA PrecursorsRNA Splicing FactorsB52 protein, DrosophilaDrosophila ProteinsNuclear ProteinsPhosphoproteinsRNA-Binding ProteinsRNA PrecursorsRNA Splicing Factors

Identifiers

PMID10594020
PMCPMC85073
OpenAlexW2107774967

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.