ArticleNucleic acids research2000
MODBASE, a database of annotated comparative protein structure models.
Article in Nucleic acids research, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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Who cites it
11 citing papers in PubMed.
- Human Indoleamine 2,3-dioxygenase 1 (IDO1) Expressed in Plant Cells Induces Kynurenine Production.International journal of molecular sciences · 2021Article
- eModel-BDB: a database of comparative structure models of drug-target interactions from the Binding Database.GigaScience · 2018Article
- Protein evolution in deep sea bacteria: an analysis of amino acids substitution rates.BMC evolutionary biology · 2008Article
- Three dimensional modeling of N-terminal region of galanin and its interaction with the galanin receptor.Bioinformation · 2007Article
- High-throughput computational and experimental techniques in structural genomics.Genome research · 2004Article
- MODBASE, a database of annotated comparative protein structure models, and associated resources.Nucleic acids research · 2004Article
- Tools for comparative protein structure modeling and analysis.Nucleic acids research · 2003Article
- Rubisco activase - Rubisco's catalytic chaperone.Photosynthesis research · 2003Article
- GTOP: a database of protein structures predicted from genome sequences.Nucleic acids research · 2002Article
- MODBASE, a database of annotated comparative protein structure models.Nucleic acids research · 2002Article
- Structural genomics of enzymes involved in sterol/isoprenoid biosynthesis.Proceedings of the National Academy of Sciences of the United States of America · 2001Article
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Authors and funding
6 authors.
Funding
Abstract
MODBASE is a queryable database of annotated comparative protein structure models. The models are derived by MODPIPE, an automated modeling pipeline relying on the programs PSI-BLAST and MODELLER. The database currently contains 3D models for substantial portions of approximately 17 000 proteins from 10 complete genomes, including those of Caenorhabditis elegans, Saccharomyces cerevisiae and Escherichia coli, as well as all the available sequences from Arabidopsis thaliana and Homo sapiens. The database also includes fold assignments and alignments on which the models were based. In addition, special care is taken to assess the quality of the models. ModBase is accessible through a web interface at http://guitar.rockefeller.edu/modbase/
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Registered trials
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