Evidence map›Paper›PMID 10588720›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1999

Genomic analysis of human and mouse TCL1 loci reveals a complex of tightly clustered genes.

C Hallas, Y Pekarsky, T Itoyama, J Varnum, R Bichi, J L Rothstein, C M Croce

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Detection of Epstein-Barr virus in T-cell prolymphocytic leukemia cells in vitro.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2008
    Article
  10. Article
  11. MicroRNAs and genomic instability.Seminars in cancer biology · 2007
    Review
  12. Review
  13. Article
  14. Article
  15. TCL1 participates in early embryonic development and is overexpressed in human seminomas.Proceedings of the National Academy of Sciences of the United States of America · 2002
    Article
  16. Review
  17. Article
  18. Tcl1 enhances Akt kinase activity and mediates its nuclear translocation.Proceedings of the National Academy of Sciences of the United States of America · 2000
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

C HallasKimmel Cancer Institute, Thomas Jefferson University, 233 South 10th Street, Philadelphia, PA 19107, USA.
Y Pekarsky
T Itoyama
J Varnum
R Bichi
J L Rothstein
C M Croce
Jefferson College · USThomas Jefferson University · US

Funding

Structural Analysis of TCL-1 and MTCP-1 ProteinsP01CA076259 · NCI · THOMAS JEFFERSON UNIVERSITY · PI CROCE, CARLO M · 1999 to 2003
$6.1M
NCI NIH HHS P01 CA076259NCI NIH HHS P01 CA 76259
6 · The paper itself

Abstract

TCL1 and TCL1b genes on human chromosome 14q23.1 are activated in T cell leukemias by translocations and inversions at 14q32.1, juxtaposing them to regulatory elements of T cell receptor genes. In this report we present the cloning, mapping, and expression analysis of the human and murine TCL1/Tcl1 locus. In addition to TCL1 and TCL1b, the human locus contains two additional genes, TCL1-neighboring genes (TNG) 1 and 2, encoding proteins of 141 and 110 aa, respectively. Both genes show no homology to any known genes, but their expression profiles are very similar to those of TCL1 and TCL1b. TNG1 and TNG2 also are activated in T cell leukemias with rearrangements at 14q32.1. To aid in the development of a mouse model we also have characterized the murine Tcl1 locus and found five genes homologous to human TCL1b. Tcl1b1-Tcl1b5 proteins range from 117 to 123 aa and are 65-80% similar, but they show only a 30-40% similarity to human TCL1b. All five mouse Tcl1b and murine Tcl1 mRNAs are abundant in mouse oocytes and two-cell embryos but rare in various adult tissues and lymphoid cell lines. These data suggest a similar or complementary function of these proteins in early embryogenesis.

Indexed as

Chromosome MappingMultigene FamilyProto-Oncogene ProteinsAmino Acid SequenceAnimalsDNA-Binding ProteinsHumansMiceMolecular Sequence DataReverse Transcriptase Polymerase Chain ReactionRNA, MessengerTranscription FactorsTumor Cells, CulturedDNA-Binding ProteinsProto-Oncogene ProteinsRNA, MessengerTCL1A protein, humanTcl1 protein, mouseTranscription Factors

Identifiers

PMID10588720
PMCPMC24451
OpenAlexW2087519438

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.