Evidence map›Paper›PMID 10567519›Full record

ArticleMolecular and cellular biology1999

Splicing of the meiosis-specific HOP2 transcript utilizes a unique 5' splice site.

J Y Leu, G S Roeder

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
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  7. Article
  8. Snu56p is required for Mer1p-activated meiotic splicing.Molecular and cellular biology · 2008
    Article
  9. High-density yeast-tiling array reveals previously undiscovered introns and extensive regulation of meiotic splicing.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

J Y LeuDepartment of Molecular, Cellular and Developmental Biology, Howard Hughes Medical Institute, Yale University, New Haven, Connecticut 06520-8103, USA.
G S Roeder
Howard Hughes Medical Institute · USInstitut thématique Génétique, génomique et bioinformatique · FR

Funding

MOLECULAR MECHANISMS OF GENETIC RECOMBINATION IN YEASTR01GM028904 · NIGMS · YALE UNIVERSITY · PI ROEDER, GLENNA · 1985 to 2005
$651k
NIGMS NIH HHS GM28904NIGMS NIH HHS R01 GM028904
6 · The paper itself

Abstract

The Saccharomyces cerevisiae HOP2 gene is required to prevent formation of synaptonemal complex between nonhomologous chromosomes during meiosis. The HOP2 gene is expressed specifically in meiotic cells, with the transcript reaching maximum abundance early in meiotic prophase. The HOP2 coding region is interrupted by an intron located near the 5' end of the gene. This intron contains a nonconsensus 5' splice site (GUUAAGU) that differs from the consensus 5' splice signal (GUAPyGU) by the insertion of a nucleotide and by a single nucleotide substitution. Bases flanking the HOP2 5' splice site have the potential to pair with sequences in U1 small nuclear RNA, and mutations disrupting this pairing reduce splicing efficiency. HOP2 pre-mRNA is spliced efficiently in the absence of the Mer1 and Nam8 proteins, which are required for splicing the transcripts of two other meiosis-specific genes.

Indexed as

MeiosisRibonucleoproteins, Small NuclearRNA SplicingSaccharomyces cerevisiae Proteins5' Untranslated RegionsBase SequenceBinding SitesDNA, FungalFungal ProteinsIntronsMolecular Sequence DataMutagenesisProphaseRNA-Binding ProteinsRNA, FungalRNA Precursors5' Untranslated RegionsDNA, FungalFungal ProteinsHOP2 protein, S cerevisiaeMER1 protein, S cerevisiaeNAM8 protein, S cerevisiaeRibonucleoproteins, Small NuclearRNA-Binding ProteinsRNA, FungalRNA PrecursorsSaccharomyces cerevisiae Proteins

Identifiers

PMID10567519
PMCPMC84878
OpenAlexW2167772058

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.