Evidence map›Paper›PMID 10564278›Full record

ArticleMolecular biology of the cell1999

Box H and box ACA are nucleolar localization elements of U17 small nucleolar RNA.

T S Lange, M Ezrokhi, F Amaldi, S A Gerbi

Abstract read
In one paragraph

Article in Molecular biology of the cell, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. SnoRNAs: Exploring Their Implication in Human Diseases.International journal of molecular sciences · 2024
    Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Human box H/ACA pseudouridylation guide RNA machinery.Molecular and cellular biology · 2004
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

T S LangeDivision of Biology and Medicine, Brown University, Providence, Rhode Island 02912, USA.
M Ezrokhi
F Amaldi
S A Gerbi

Funding

INACTIVATION OF PHOSPHATASES BY REACTIVE OXYGENF32GM020261 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI GLAVEN, JUDITH A · 1999 to 1999
–
NIGMS NIH HHS F32 GM020261NIGMS NIH HHS GM20261
6 · The paper itself

Abstract

The nucleolar localization elements (NoLEs) of U17 small nucleolar RNA (snoRNA), which is essential for rRNA processing and belongs to the box H/ACA snoRNA family, were analyzed by fluorescence microscopy. Injection of mutant U17 transcripts into Xenopus laevis oocyte nuclei revealed that deletion of stems 1, 2, and 4 of U17 snoRNA reduced but did not prevent nucleolar localization. The deletion of stem 3 had no adverse effect. Therefore, the hairpins of the hairpin-hinge-hairpin-tail structure formed by these stems are not absolutely critical for nucleolar localization of U17, nor are sequences within stems 1, 3, and 4, which may tether U17 to the rRNA precursor by base pairing. In contrast, box H and box ACA are major NoLEs; their combined substitution or deletion abolished nucleolar localization of U17 snoRNA. Mutation of just box H or just the box ACA region alone did not fully abolish the nucleolar localization of U17. This indicates that the NoLEs of the box H/ACA snoRNA family function differently from the bipartite NoLEs (conserved boxes C and D) of box C/D snoRNAs, where mutation of either box alone prevents nucleolar localization.

Indexed as

AnimalsBase SequenceCell NucleolusConserved SequenceEvolution, MolecularMicroinjectionsMicroscopy, FluorescenceMolecular Sequence DataMutationNucleic Acid ConformationOocytesRNA, NuclearRNA, RibosomalRNA, Small NucleolarSequence DeletionXenopusRNA, NuclearRNA, RibosomalRNA, Small Nucleolar

Identifiers

PMID10564278
PMCPMC25686

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.