Evidence map›Paper›PMID 10564273›Full record

ArticleMolecular biology of the cell1999

Nuclear domains enriched in RNA 3'-processing factors associate with coiled bodies and histone genes in a cell cycle-dependent manner.

W Schul, I van Der Kraan, A G Matera, R van Driel, L de Jong

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. The abbreviated pluripotent cell cycle.Journal of cellular physiology · 2013
    Review
  5. Review
  6. Gene positioning.Cold Spring Harbor perspectives in biology · 2010
    Review
  7. Article
  8. Review
  9. Review
  10. Review
  11. The Drosophila melanogaster Cajal body.The Journal of cell biology · 2006
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Functional architecture in the cell nucleus.The Biochemical journal · 2001
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

W SchulE. C. Slater Instituut, University of Amsterdam, BioCentrum Amsterdam, 1018 TV Amsterdam, The Netherlands.
I van Der Kraan
A G Matera
R van Driel
L de Jong
University of Amsterdam · NLCenter for Human Genetics · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear domains, called cleavage bodies, are enriched in the RNA 3'-processing factors CstF 64 kDa and and CPSF 100 kDa. Cleavage bodies have been found either overlapping with or adjacent to coiled bodies. To determine whether the spatial relationship between cleavage bodies and coiled bodies was influenced by the cell cycle, we performed cell synchronization studies. We found that in G1 phase cleavage bodies and coiled bodies were predominantly coincident, whereas in S phase they were mostly adjacent to each other. In G2 cleavage bodies were often less defined or absent, suggesting that they disassemble at this point in the cell cycle. A small number of genetic loci have been reported to be juxtaposed to coiled bodies, including the genes for U1 and U2 small nuclear RNA as well as the two major histone gene clusters. Here we show that cleavage bodies do not overlap with small nuclear RNA genes but do colocalize with the histone genes next to coiled bodies. These findings demonstrate that the association of cleavage bodies and coiled bodies is both dynamic and tightly regulated and suggest that the interaction between these nuclear neighbors is related to the cell cycle-dependent expression of histone genes.

Indexed as

Cell CycleFluorescent Antibody TechniqueHistonesHumansIn Situ Hybridization, FluorescenceInterphaseMicroscopy, ConfocalmRNA Cleavage and Polyadenylation FactorsNuclear ProteinsRNARNA-Binding ProteinsRNA, Small NuclearS PhaseTumor Cells, CulturedHistonesmRNA Cleavage and Polyadenylation FactorsNuclear ProteinsRNARNA-Binding ProteinsRNA, Small Nuclear

Identifiers

PMID10564273
PMCPMC25681
OpenAlexW2148597965

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.