Evidence map›Paper›PMID 10559336›Full record

ArticleJournal of virology1999

Characterization of primary isolate-like variants of simian-human immunodeficiency virus.

J M Crawford, P L Earl, B Moss, K A Reimann, M S Wyand, K H Manson, M Bilska, J T Zhou, C D Pauza, P W Parren and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 81 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 2 countries.

J M CrawfordDepartment of Surgery, Duke University Medical Center, Durham, North Carolina 27710, USA.
P L Earl
B Moss
K A Reimann
M S Wyand
K H Manson
M Bilska
J T Zhou
C D Pauza
P W Parren
D R Burton
J G Sodroski
N L Letvin
D C Montefiori
Duke Medical Center · USDuke University · USHadassah Medical Center · ILNational Institute of Allergy and Infectious Diseases · USScripps Research Institute · USHarvard University · USUniversity of Wisconsin–Madison · US

Funding

RESOURCE FOR NONHUMAN PRIMATE CELL DEPLETING ANTIBODIESR24RR016001 · NCRR · BETH ISRAEL DEACONESS MEDICAL CENTER · PI REIMANN, KEITH A. · 2000 to 2011
$8.1M
HUMAN ANTIBODIES TO HIV-1 BY REPERTOIRE CLONINGR01AI033292 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI BURTON, DENNIS R. · 1992 to 2013
$5.9M
Immunobiology of Regulatory T Cells in HIV InfectionR01AI065303 · NIAID · VANDERBILT UNIVERSITY · PI UNUTMAZ, DERYA · 2005 to 2015
$4.3M
Recombinant Vaccines for Prevention of AIDS and Other DiseasesZ01AI000416 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI MOSS, BERNARD · 1985 to 2008
$3.3M
HUMAN ANTIBODIES TO HIV-1 BY REPERTOIRE CLONINGR37AI033292 · NIAID · SCRIPPS RESEARCH INSTITUTE · PI BURTON, DENNIS R. · 1995 to 2004
$2.4M
VIRUS VARIATION AND SEXUAL TRANSMISSION OF SIVR01AI036643 · NIAID · UNIVERSITY OF WISCONSIN MADISON · PI PAUZA, CHARLES DAVID · 1995 to 1997
–
NCRR NIH HHS R24 RR016001NIAID NIH HHS AI36643NIAID NIH HHS AI65303NIAID NIH HHS AI-85345NIAID NIH HHS R01 AI033292NIAID NIH HHS R01 AI065303NIAID NIH HHS R37 AI033292
6 · The paper itself

Abstract

Several different strains of simian-human immunodeficiency virus (SHIV) that contain the envelope glycoproteins of either T-cell-line-adapted (TCLA) strains or primary isolates of human immunodeficiency virus type 1 (HIV-1) are now available. One of the advantages of these chimeric viruses is their application to studies of HIV-1-specific neutralizing antibodies in preclinical AIDS vaccine studies in nonhuman primates. In this regard, an important consideration is the spectrum of antigenic properties exhibited by the different envelope glycoproteins used for SHIV construction. The antigenic properties of six SHIV variants were characterized here in neutralization assays with recombinant soluble CD4 (rsCD4), monoclonal antibodies, and serum samples from SHIV-infected macaques and HIV-1-infected individuals. Neutralization of SHIV variants HXBc2, KU2, 89.6, and 89.6P by autologous and heterologous sera from SHIV-infected macaques was restricted to an extent that these viruses may be considered heterologous to one another in their major neutralization determinants. Little or no variation was seen in the neutralization determinants on SHIV variants 89.6P, 89.6PD, and SHIV-KB9. Neutralization of SHIV HXBc2 by sera from HXBc2-infected macaques could be blocked with autologous V3-loop peptide; this was less true in the case of SHIV 89.6 and sera from SHIV 89.6-infected macaques. The poorly immunogenic but highly conserved epitope for monoclonal antibody IgG1b12 was a target for neutralization on SHIV variants HXBc2, KU2, and 89.6 but not on 89.6P and KB9. The 2G12 epitope was a target for neutralization on all five SHIV variants. SHIV variants KU2, 89.6, 89.6P, 89.6PD, and KB9 exhibited antigenic properties characteristic of primary isolates by being relatively insensitive to neutralization in peripheral blood mononuclear cells with serum samples from HIV-1-infected individuals and 12-fold to 38-fold less sensitive to inhibition with recombinant soluble CD4 than TCLA strains of HIV-1. The utility of nonhuman primate models in AIDS vaccine development is strengthened by the availability of SHIV variants that are heterologous in their neutralization determinants and exhibit antigenic properties shared with primary isolates.

Indexed as

Genetic VariationAmino Acid SequenceAnimalsHIV-1HIV AntibodiesHIV Envelope Protein gp120HIV InfectionsHumansMacacaMolecular Sequence DataNeutralization TestsPeptide FragmentsRecombination, GeneticSimian Immunodeficiency VirusTumor Cells, CulturedHIV AntibodiesHIV Envelope Protein gp120HIV envelope protein gp120 (305-321)Peptide Fragments

Identifiers

PMID10559336
PMCPMC113073
OpenAlexW2100593780

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.