Evidence map›Paper›PMID 10559285›Full record

ArticleJournal of virology1999

The activation domain of herpesvirus saimiri R protein interacts with the TATA-binding protein.

K T Hall, A J Stevenson, D J Goodwin, P C Gibson, A F Markham, A Whitehouse

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 31 citations in OpenAlex.

  1. mViruses · 2023
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  15. Herpesvirus saimiri.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2001
    Review
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

K T HallMolecular Medicine Unit, University of Leeds, St. James's University Hospital, Leeds LS9 7TF, United Kingdom.
A J Stevenson
D J Goodwin
P C Gibson
A F Markham
A Whitehouse
St James's University Hospital · GBUniversity of Leeds · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The herpesvirus saimiri open reading frame (ORF) 50 produces two transcripts. The first is spliced, contains a single intron, and is detected at early times during the productive cycle, whereas the second is expressed later and is produced from a promoter within the second exon. Analysis of their gene products has shown that they function as sequence specific transactivators. In this report, we demonstrate that the carboxy terminus of ORF 50b contains an activation domain which is essential for transactivation. This domain contains positionally conserved hydrophobic residues found in a number of activation domains, including the herpes simplex virus VP16 and the Epstein-Barr virus R proteins. Mutational analysis of this domain demonstrates that these conserved hydrophobic residues are essential for ORF 50 transactivation capability. Furthermore, this domain is required for the interaction between the ORF 50 proteins and the basal transcription factor TATA-binding protein.

Indexed as

Herpesvirus 2, SaimiriineTranscriptional ActivationAmino Acid SequenceAnimalsAotidaeBinding SitesCell LineDNA-Binding ProteinsDNA Mutational AnalysisImmediate-Early ProteinsMolecular Sequence DataPromoter Regions, GeneticRabbitsResponse ElementsTATA-Box Binding ProteinTrans-ActivatorsBRLF1 protein, Human herpesvirus 4DNA-Binding ProteinsImmediate-Early ProteinsTATA-Box Binding ProteinTrans-ActivatorsTranscription FactorsViral Proteins

Identifiers

PMID10559285
PMCPMC113022
OpenAlexW2118114686

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.