Evidence map›Paper›PMID 10527422›Full record

ArticlePlant molecular biology1999

Construction and characterization of a common bean bacterial artificial chromosome library.

W Vanhouten, S MacKenzie

Abstract read
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Cytogenetic map of common bean (Phaseolus vulgaris L.).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2010
    Article
  5. Article
  6. Article
  7. Article
  8. Development of four phylogenetically-arrayed BAC libraries and sequence of the APA locus in Phaseolus vulgaris.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006
    Article
  9. Article
  10. Article
  11. Construction and characterization of a peanut HindIII BAC library.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2005
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

W VanhoutenDepartment of Agronomy, Purdue University, West Lafayette, IN 47907, USA.
S MacKenzie
Purdue University West Lafayette · US

Funding

POSITIONAL CLONING OF THE FR LOCUSR21GM054154 · NIGMS · PURDUE UNIVERSITY WEST LAFAYETTE · PI MACKENZIE, SALLY A · 1996 to 1997
–
NIGMS NIH HHS R21 GM 54154-01
6 · The paper itself

Abstract

We have constructed a common bean (Phaseolus vulgaris L.) bacterial artificial chromosome (BAC) library consisting of 33,792 clones and an estimated 3- to 5-fold coverage of the common bean genome. Leaf nuclei were used as the source for high-molecular-weight DNA, and an endonuclease/methylase competition assay was employed to partially cleave the DNA. The library was screened with a number of nuclear and mitochondrial probes. Each nuclear probe identified at least two BACs with an average insert size of ca. 100 kb. Only 26 clones were identified after hybridizing with mitochondrial probes, indicating contamination with organellar sequences is low. Numerous clones could be identified after screening the library with two repetitive probes flanking the nuclear fertility restorer Fr. Intriguingly, 12 clones appeared to hybridize to both markers, and restriction analysis of these clones revealed that they can be assembled into maximally four contigs, suggesting that these repetitive probes may be useful for the physical mapping of the Fr locus.

Indexed as

Genomic LibraryPlants, MedicinalChromosomes, BacterialCloning, MolecularDNA, PlantDNA ProbesFabaceaeFertilityGenes, PlantGenetic LinkageGenetic MarkersNucleic Acid HybridizationDNA, PlantDNA ProbesGenetic Markers

Identifiers

PMID10527422
OpenAlexW1899042606

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.