Evidence map›Paper›PMID 10523662›Full record

ArticleMolecular and cellular biology1999

Pta1, a component of yeast CF II, is required for both cleavage and poly(A) addition of mRNA precursor.

J Zhao, M Kessler, S Helmling, J P O'Connor, C Moore

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 89 citations in OpenAlex.

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  8. Aep3p-dependent translation of yeast mitochondrialMolecular biology of the cell · 2017
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  18. Structural and biochemical analysis of the assembly and function of the yeast pre-mRNA 3' end processing complex CF I.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

J ZhaoDepartment of Molecular Biology, School of Medicine, Tufts University, Boston, Massachusetts, USA.
M Kessler
S Helmling
J P O'Connor
C Moore
Tufts University · USRutgers, The State University of New Jersey · US

Funding

Molecular mechanism of mRNA 3'-end formation in yeastR01GM041752 · NIGMS · TUFTS UNIVERSITY BOSTON · PI MOORE, CLAIRE L · 1989 to 2010
$4.0M
NIGMS NIH HHS R01 GM041752NIGMS NIH HHS R01 GM41752
6 · The paper itself

Abstract

CF II, a factor required for cleavage of the 3' ends of mRNA precursor in Saccharomyces cerevisiae, has been shown to contain four polypeptides. The three largest subunits, Cft1/Yhh1, Cft2/Ydh1, and Brr5/Ysh1, are homologs of the three largest subunits of mammalian cleavage-polyadenylation specificity factor (CPSF), an activity needed for both cleavage and poly(A) addition. In this report, we show by protein sequencing and immunoreactivity that the fourth subunit of CF II is Pta1, an essential 90-kDa protein originally implicated in tRNA splicing. Yth1, the yeast homolog of the CPSF 30-kDa subunit, is not detected in this complex. Extracts prepared from pta1 mutant strains are impaired in the cleavage and the poly(A) addition of both GAL7 and CYC1 substrates and exhibit little processing activity even after prolonged incubation. However, activity is efficiently rescued by the addition of purified CF II to the defective extracts. Extract from a strain with a mutation in the CF IA subunit Rna14 also restored processing, but extract from a brr5-1 strain did not. The amounts of Pta1 and other CF II subunits are reduced in pta1 strains, suggesting that levels of the subunits may be coordinately regulated. Coimmunoprecipitation experiments indicate that the CF II in extract can be found in a stable complex containing Pap1, CF II, and the Fip1 and Yth1 subunits of polyadenylation factor I. While purified CF II does not appear to retain the association with these other factors, this larger complex may be the form recruited onto pre-mRNA in vivo. The involvement of Pta1 in both steps of mRNA 3'-end formation supports the conclusion that CF II is the functional homolog of CPSF.

Indexed as

RNA Processing, Post-TranscriptionalSaccharomyces cerevisiae ProteinsBasic-Leucine Zipper Transcription FactorsDNA-Binding ProteinsFungal ProteinsmRNA Cleavage and Polyadenylation FactorsMutationPancreatitis-Associated ProteinsPoly APrecipitin TestsProtein BindingRNA-Binding ProteinsRNA, MessengerRNA PrecursorsSaccharomyces cerevisiaeSchizosaccharomyces pombe ProteinsBasic-Leucine Zipper Transcription FactorsDNA-Binding ProteinsFungal ProteinsmRNA Cleavage and Polyadenylation FactorsPancreatitis-Associated ProteinsPap1 protein, S pombePoly APTA1 protein, S cerevisiaeREG3A protein, humanRNA-Binding ProteinsRNA, MessengerRNA PrecursorsSaccharomyces cerevisiae ProteinsSchizosaccharomyces pombe Proteins

Identifiers

PMID10523662
PMCPMC84822
OpenAlexW2150995539

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.