Evidence map›Paper›PMID 10523649›Full record

ArticleMolecular and cellular biology1999

A human TATA binding protein-related protein with altered DNA binding specificity inhibits transcription from multiple promoters and activators.

P A Moore, J Ozer, M Salunek, G Jan, D Zerby, S Campbell, P M Lieberman

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 96 citations in OpenAlex.

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  10. TRF2 and the evolution of the bilateria.Genes & development · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

P A MooreHuman Genome Sciences, Rockville, Maryland 20850, USA.
J Ozer
M Salunek
G Jan
D Zerby
S Campbell
P M Lieberman
The Wistar Institute · USUniversity of Aberdeen · GBHuman Genome Sciences (United States) · US

Funding

Functions of the General Coactivator TFIIAR01GM054687 · NIGMS · WISTAR INSTITUTE · PI LIEBERMAN, PAUL M. · 1996 to 2005
$1.5M
NIGMS NIH HHS GM54687NIGMS NIH HHS R01 GM054687
6 · The paper itself

Abstract

The TATA binding protein (TBP) plays a central role in eukaryotic and archael transcription initiation. We describe the isolation of a novel 23-kDa human protein that displays 41% identity to TBP and is expressed in most human tissue. Recombinant TBP-related protein (TRP) displayed barely detectable binding to consensus TATA box sequences but bound with slightly higher affinities to nonconsensus TATA sequences. TRP did not substitute for TBP in transcription reactions in vitro. However, addition of TRP potently inhibited basal and activated transcription from multiple promoters in vitro and in vivo. General transcription factors TFIIA and TFIIB bound glutathione S-transferase-TRP in solution but failed to stimulate TRP binding to DNA. Preincubation of TRP with TFIIA inhibited TBP-TFIIA-DNA complex formation and addition of TFIIA overcame TRP-mediated transcription repression. TRP transcriptional repression activity was specifically reduced by mutations in TRP that disrupt the TFIIA binding surface but not by mutations that disrupt the TFIIB or DNA binding surface of TRP. These results suggest that TFIIA is a primary target of TRP transcription inhibition and that TRP may modulate transcription by a novel mechanism involving the partial mimicry of TBP functions.

Indexed as

Gene Expression RegulationPromoter Regions, GeneticTranscription, GeneticAmino Acid SequenceBinding SitesCloning, MolecularConserved SequenceDNA-Binding ProteinsDNA, ComplementaryEvolution, MolecularGlutathione TransferaseHumansMolecular Sequence DataNucleic Acid Synthesis InhibitorsProtein BindingRepetitive Sequences, Amino AcidDNA-Binding ProteinsDNA, ComplementaryGlutathione TransferaseNucleic Acid Synthesis InhibitorsRepressor ProteinsTATA-Box Binding ProteinTATA Box Binding Protein-Like ProteinsTranscription FactorsTranscription Factor TFIIATranscription Factor TFIIB

Identifiers

PMID10523649
PMCPMC84787
OpenAlexW2134555383

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.