Evidence map›Paper›PMID 10523572›Full record

ArticleJournal of clinical microbiology1999

Detection of human herpesvirus 6 by reverse transcription-PCR.

R A Norton, M T Caserta, C B Hall, K Schnabel, P Hocknell, S Dewhurst

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of clinical microbiology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 87 citations in OpenAlex.

  1. Article
  2. Observational
  3. Article
  4. RNA Sequencing of theJournal of virology · 2019
    Article
  5. Article
  6. A Celebration of the Life and Work of Caroline Breese Hall, MD.Journal of the Pediatric Infectious Diseases Society · 2016
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Diagnostic assays for active infection with human herpesvirus 6 (HHV-6).Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2010
    Article
  13. Article
  14. Beta-herpesviruses in febrile children with cancer.Emerging infectious diseases · 2008
    Article
  15. Review
  16. Human Herpesvirus 6 Infection of the Central Nervous System.Current infectious disease reports · 2004
    Article
  17. Real-time quantitative PCR for human herpesvirus 6 DNA.Journal of clinical microbiology · 2000
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

R A NortonDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, New York 14642, USA. Renee_Norton@urmc.rochester.edu
M T Caserta
C B Hall
K Schnabel
P Hocknell
S Dewhurst
Office of Infectious Diseases · USUniversity of Rochester Medical Center · US

Funding

YOHIMBINE CHALLENGE IN PARKINSONIAN PATIENTS WITH PANIC DISORDERM01RR000044 · NCRR · UNIVERSITY OF ROCHESTER · PI GUZICK, DAVID S · 1985 to 2006
$13.8M
PRIMARY HHV6 INFECTION--CLINICAL &VIRAL CHARACTERISTICSR01AI033020 · NIAID · UNIVERSITY OF ROCHESTER · PI HALL, CAROLINE BREESE · 1992 to 2001
$1.6M
PATHOGENESIS AND THERAPY FOR LENTIVIRUSESK04AI001240 · NIAID · UNIVERSITY OF ROCHESTER · PI DEWHURST, STEPHEN · 1994 to 1998
–
NCRR NIH HHS 5 MO1 RR00044NCRR NIH HHS M01 RR000044NIAID NIH HHS KO4 AI01240NIAID NIH HHS R01 AI33020-06
6 · The paper itself

Abstract

The role of human herpesvirus 6 (HHV-6) in disease beyond primary infection remains unclear. We have developed and validated a new reverse transcription-PCR (RT-PCR) assay for HHV-6 that can determine the presence of HHV-6 in clinical specimens and differentiate between latent and replicating virus. Peripheral blood mononuclear cells from 109 children were evaluated for HHV-6 by RT-PCR, DNA PCR, and viral culture. Of these samples, 106 were suitable for analysis. A total of 20 samples were positive for HHV-6 by culture and DNA PCR, of which 19 were positive by RT-PCR (sensitivity, 95%). All 28 samples from children that were negative by viral culture, but positive by DNA PCR, were negative for viral transcripts by our RT-PCR assay. One positive RT-PCR result was observed in 56 samples that were negative by tissue culture and DNA PCR. This indicates a low rate of false-positive results (1.2%) and a specificity of 98.8%. This RT-PCR assay can reliably differentiate between latent and actively replicating HHV-6 and should allow insight into the pathogenesis of this ubiquitous virus.

Indexed as

Base SequenceChild, PreschoolDiagnostic ErrorsDNA PrimersDNA, ViralEvaluation Studies as TopicFemaleHerpesviridae InfectionsHerpesvirus 6, HumanHumansInfantMaleReverse Transcriptase Polymerase Chain ReactionSensitivity and SpecificityVirologyVirus CultivationDNA PrimersDNA, Viral

Identifiers

PMID10523572
PMCPMC85721
OpenAlexW1574728834

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.