Evidence map›Paper›PMID 10521304›Full record

ArticleAmerican journal of human genetics1999

Chromosome breakage hotspots and delineation of the critical region for the 9p-deletion syndrome.

L A Christ, C A Crowe, M A Micale, J M Conroy, S Schwartz

Abstract read
In one paragraph

Article in American journal of human genetics, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Precise breakpoint detection in a patient with 9p- syndrome.Cold Spring Harbor molecular case studies · 2020
    Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Clinical and neuroradiological features of the 9p deletion syndrome.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2016
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Genetic basis of single-suture synostoses: genes, chromosomes and clinical implications.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2012
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

L A ChristDepartment of Genetics, Center for Human Genetics, Case Western Reserve University School of Medicine and University Hospitals of Cleveland, OH, USA.
C A Crowe
M A Micale
J M Conroy
S Schwartz

Funding

PHENOTYPE/GENOTYPE CORRELATIONS IN 9P DELETION SYNDROMER03HD036252 · NICHD · CASE WESTERN RESERVE UNIVERSITY · PI SCHWARTZ, STUART · 1999 to 2000
$77k
NICHD NIH HHS HD36252
6 · The paper itself

Abstract

The clinical features of the 9p-deletion syndrome include dysmorphic facial features (trigonocephaly, midface hypoplasia, upward-slanting palpebral fissures, and a long philtrum) and mental retardation. The majority of these patients appear to have similar cytogenetic breakpoints in 9p22, but some cases show phenotypic heterogeneity. To define the breakpoints of the deleted chromosomes, we studied 24 patients with a deletion of 9p, by high-resolution cytogenetics, FISH with 19 YACs, and PCR using 25 different sequence-tagged sites. Of 10 different breakpoints identified, 9 were localized within an approximately 5-Mb region, in 9p22-p23, that encompasses the interval between D9S1869 (telomeric) and D9S162 (centromeric). Eight unrelated patients had a breakpoint (group 1) in the same interval, between D9S274 (948h1) and D9S285 (767f2), suggesting a chromosome-breakage hotspot. Among 12 patients, seven different breakpoints (groups 3-9) were localized to a 2-Mb genomic region between D9S1709 and D9S162, which identified a breakpoint-cluster region. The critical region for the 9p-deletion syndrome maps to a 4-6-Mb region in 9p22-p23. The results from this study have provided insight into both the heterogeneous nature of the breakage in this deletion syndrome and the resultant phenotype-karyotype correlations.

Indexed as

Chromosome BreakageChromosome DeletionAbnormalities, MultipleCells, CulturedChromosomes, Artificial, YeastChromosomes, Human, Pair 9Craniofacial AbnormalitiesHumansIn Situ Hybridization, FluorescenceLeukocytesPolymerase Chain ReactionSequence Tagged Sites

Identifiers

PMID10521304
PMCPMC1288291

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.