Evidence map›Paper›PMID 10516018›Full record

ArticleJournal of virology1999

Site-directed mutagenesis of the virion host shutoff gene (UL41) of herpes simplex virus (HSV): analysis of functional differences between HSV type 1 (HSV-1) and HSV-2 alleles.

D N Everly, G S Read

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

D N EverlySchool of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110, USA.
G S Read
University of Missouri–Kansas City · US

Funding

TRANSLATIONAL CONTROL IN HSV INFECTED CELLSR01AI021501 · NIAID · UNIVERSITY OF MISSOURI KANSAS CITY · PI READ, G. SULLIVAN · 1985 to 2008
$1.7M
Control of mRNA Stability in HSV Infected CellsR21AI021501 · NIAID · UNIVERSITY OF MISSOURI KANSAS CITY · PI READ, G. SULLIVAN · 2003 to 2003
$252k
NIAID NIH HHS AI21501NIAID NIH HHS R01 AI021501NIAID NIH HHS R21 AI021501
6 · The paper itself

Abstract

During lytic herpes simplex virus (HSV) infections, the HSV virion host shutoff protein (UL41) accelerates the turnover of host and viral mRNAs. Although the UL41 polypeptides from HSV type 1 (HSV-1) strain KOS and HSV-2 strain 333 are 87% identical, HSV-2 strains generally shut off the host more rapidly and completely than HSV-1 strains. In a previous study, we identified three regions of the HSV-2 UL41 polypeptide (amino acids 1 to 135, 208 to 243, and 365 to 492) that enhance the activity of KOS when substituted for the corresponding portions of the KOS protein (D. N. Everly, Jr., and G. S. Read, J. Virol. 71:7157-7166, 1997). These results have been extended through the analysis of more than 50 site-directed mutants of UL41 in which selected HSV-2 amino acids were introduced into an HSV-1 background and HSV-1 amino acids were introduced into the HSV-2 allele. The HSV-2 amino acids R22 and E25 were found to contribute dramatically to the greater activity of the HSV-2 allele, as did the HSV-2 amino acids A396 and S423. The substitution of six HSV-2 amino acids between residues 210 and 242 enhanced the HSV-1 activity to a lesser extent. In most cases, individual substitutions or the substitution of combinations of fewer than all six amino acids reduced the UL41 activity to less than that of KOS. The results pinpoint several type-specific amino acids that are largely responsible for the greater activity of the UL41 polypeptide of HSV-2. In addition, several spontaneous mutations that abolish detectable UL41 activity were identified.

Indexed as

Mutagenesis, Site-DirectedAllelesAmino Acid SequenceHerpes SimplexHerpesvirus 1, HumanHerpesvirus 2, HumanHumansMolecular Sequence DataPlasmidsRNA, MessengerRNA, ViralSequence Analysis, DNAViral Proteinsherpes simplex virus type 2 protein UL41RNA, MessengerRNA, ViralUl41 protein, Human herpesvirus 1Viral Proteins

Identifiers

PMID10516018
PMCPMC112944
OpenAlexW2099726289

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.