Evidence map›Paper›PMID 10511567›Full record

ArticleGenetics1999

The molecular genetics of red and green color vision in mammals.

S Yokoyama, F B Radlwimmer

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 121 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Making a bat: The developmental basis of bat evolution.Genetics and molecular biology · 2021
    Article
  6. Article
  7. Article
  8. Six6 and Six7 coordinately regulate expression of middle-wavelength opsins in zebrafish.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Receptive field properties of color opponent neurons in the cat lateral geniculate nucleus.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2013
    Article
  15. Article
  16. Article
  17. Article
  18. The evolution of color vision in nocturnal mammals.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

S YokoyamaDepartment of Biology, Syracuse University, Syracuse, New York 13244, USA. syokoyam@mailbox.syr.edu
F B Radlwimmer
Syracuse University · US

Funding

MOLECULAR EVOLUTION OF VISUAL PIGMENT GENES IN ASTYANAXR01GM042379 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI YOKOYAMA, SHOZO · 1990 to 2002
$986k
NIGMS NIH HHS GM-42379
6 · The paper itself

Abstract

To elucidate the molecular mechanisms of red-green color vision in mammals, we have cloned and sequenced the red and green opsin cDNAs of cat (Felis catus), horse (Equus caballus), gray squirrel (Sciurus carolinensis), white-tailed deer (Odocoileus virginianus), and guinea pig (Cavia porcellus). These opsins were expressed in COS1 cells and reconstituted with 11-cis-retinal. The purified visual pigments of the cat, horse, squirrel, deer, and guinea pig have lambdamax values at 553, 545, 532, 531, and 516 nm, respectively, which are precise to within +/-1 nm. We also regenerated the "true" red pigment of goldfish (Carassius auratus), which has a lambdamax value at 559 +/- 4 nm. Multiple linear regression analyses show that S180A, H197Y, Y277F, T285A, and A308S shift the lambdamax values of the red and green pigments in mammals toward blue by 7, 28, 7, 15, and 16 nm, respectively, and the reverse amino acid changes toward red by the same extents. The additive effects of these amino acid changes fully explain the red-green color vision in a wide range of mammalian species, goldfish, American chameleon (Anolis carolinensis), and pigeon (Columba livia).

Indexed as

Evolution, MolecularPhylogenyAmino Acid SequenceAnimalsBase SequenceCatsColor PerceptionCOS CellsDeerDNA PrimersDolphinsGoatsGuinea PigsHorsesHumansMammalsDNA PrimersRecombinant ProteinsRod Opsins

Identifiers

PMID10511567
PMCPMC1460773
OpenAlexW1903674642

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.