Evidence map›Paper›PMID 10508848›Full record

ArticleGenome research1999

Characterization of physical gap sizes at human telomeres.

C M Lese, J A Fantes, H C Riethman, D H Ledbetter

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Molecular cytogenetic analysis of telomere rearrangements.Current protocols in human genetics · 2015
    Article
  5. Article
  6. Toward closing rice telomere gaps: mapping and sequence characterization of rice subtelomere regions.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2005
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

C M LeseDepartment of Human Genetics, The University of Chicago, Chicago, Illinois 60637, USA.
J A Fantes
H C Riethman
D H Ledbetter
The Wistar Institute · USUniversity of Chicago · US

Funding

PHYSICAL MAPPING OF HUMAN TELOMERIC DNAR01HG000567 · NHGRI · WISTAR INSTITUTE · PI RIETHMAN, HAROLD · 1991 to 2010
$4.1M
MOLECULAR CHARACTERIZATION OF HUMAN TELOMERESF32HG000174 · NHGRI · UNIVERSITY OF CHICAGO · PI MARTIN, CHRISTA LESE · 1997 to 1998
–
NHGRI NIH HHS 1 F32 HG00174-01NHGRI NIH HHS F32 HG000174NHGRI NIH HHS HG00567NHGRI NIH HHS R01 HG000567
6 · The paper itself

Abstract

Genome-wide physical and genetic mapping efforts have not yet fully addressed the problem of closure at the telomeric ends of human chromosomes. Targeted efforts at cloning human and mouse telomeres have succeeded in identifying unique sequences at most telomeres, but gap sizes between these telomere clones and the distal markers on integrated genetic/physical maps remain largely unknown. As telomeric regions are known to be the most gene-rich regions of the human genome, filling these gaps should have a high priority in completion of the Human Genome Project. We reported previously a first generation set of unique sequence probes for human telomeric regions. Of 41 human telomere regions, 33 were represented by unique clones with a known distance (</= 300 kb) from the end of the chromosome; clones for the remaining eight telomeric regions had not yet been identified and were represented by the most distal markers on the integrated genetic/physical map. We have identified unique telomere clones for four of the remaining telomeres, 9p, 12p, 15q, and 16p. To determine the telomeric gap size for these chromosomes and five other human telomeres, interphase FISH analysis was performed to measure the distance between each telomere clone and the corresponding most distal marker. These studies provide distance estimates ranging from <100 kb to >1 Mb, thus defining the physical mapping task for filling telomeric gaps.

Indexed as

Chromosome MappingChromosomes, BacterialChromosomes, Human, Pair 12Chromosomes, Human, Pair 15Chromosomes, Human, Pair 16Chromosomes, Human, Pair 9Databases, FactualGene LibraryHumansIn Situ Hybridization, FluorescenceTelomere

Identifiers

PMID10508848
PMCPMC310815
OpenAlexW1964439749

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.