Evidence map›Paper›PMID 10490829›Full record

ArticleOncogene1999

Allelic deletion at 11q23 is common in MYCN single copy neuroblastomas.

C Guo, P S White, M J Weiss, M D Hogarty, P M Thompson, D O Stram, R Gerbing, K K Matthay, R C Seeger, G M Brodeur and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed, 1 pooled it
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 1 synthesis or guideline pooled it, 249 citations in OpenAlex.

  1. Pooled it
  2. Trial
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  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. DNA Ligase 4 Contributes to Cell Proliferation against DNA-PK Inhibition inInternational journal of molecular sciences · 2023
    Article
  11. Article
  12. Article
  13. Bioinformatics analysis of recurrent deletion regions in neuroblastoma.Medical oncology (Northwood, London, England) · 2022
    Article
  14. Review
  15. Chromosome 11q loss andFrontiers in oncology · 2022
    Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Review

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 1 country.

C GuoDivision of Oncology, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, PA 19104, USA.
P S White
M J Weiss
M D Hogarty
P M Thompson
D O Stram
R Gerbing
K K Matthay
R C Seeger
G M Brodeur
J M Maris
Children's Hospital of Philadelphia · USArcadia · USChildren's Oncology Group · USUniversity of Pennsylvania · USUniversity of California, San Francisco · USUniversity of Southern California · US

Funding

CHILDRENS CANCER STUDY GROUP CHAIRMAN'S GRANTU10CA013539 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI REAMAN, GREGORY H · 1985 to 2002
$43.1M
ISOLATION OF THE NEUROBLASTOMA PREDISPOSITION GENER01CA078545 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI MARIS, JOHN M · 1998 to 2006
$1.9M
SIGNIFICANCE OF ALLELIC DELETIONS IN NEUROBLASTOMAU10CA078966 · NCI · CHILDREN'S HOSPITAL OF PHILADELPHIA · PI MARIS, JOHN M · 1998 to 1999
–
NCI NIH HHS CA-13539NCI NIH HHS CA-78545NCI NIH HHS CA-78966
6 · The paper itself

Abstract

Deletions of the long arm of chromosome 11 (11q) have been noted in primary neuroblastomas, but a comprehensive analysis has not been performed. Therefore, we analysed 331 neuroblastomas (295 sporadic, 15 familial and 21 tumor-derived cell lines) to determine the prevalence of 11q allelic deletions, to map the location of a putative tumor suppressor gene and to perform clinical correlative studies. Assays for loss of heterozygosity (LOH) were performed at 24 microsatellite loci spanning 11q. LOH was observed at multiple 11q loci in 129/295 (44%) sporadic neuroblastomas, 5/15 (33%) familial neuroblastomas, and 5/21 (24%) neuroblastoma cell lines. A single region of 2.1 cM within 11q23.3, flanked by markers D11S1340 and D11S1299, was deleted in all specimens with 11q LOH. Allelic loss at 11q23 was inversely related to MYCN amplification (P<0.001). Within the subset of cases with a single copy of MYCN, 11q LOH was associated with advanced stage disease (P=0.008), unfavorable histopathology (P=0.042), and decreased overall survival probability (P=0.008). However, 11q LOH was not independently prognostic in multivariate analyses. These data support the hypothesis that a tumor suppressor gene mapping within 11q23.3 is commonly inactivated during the malignant evolution of a large subset of neuroblastomas, especially those with unamplified MYCN.

Indexed as

AllelesChildChild, PreschoolChromosomes, Human, Pair 11FemaleGene AmplificationGene DosageGenes, mycGenes, Tumor SuppressorGenotypeHumansInfantLoss of HeterozygosityMaleMicrosatellite RepeatsMultivariate Analysis

Identifiers

PMID10490829
OpenAlexW2081368063

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.