Evidence map›Paper›PMID 10477556›Full record

ArticleThe Journal of experimental medicine1999

Measuring recent thymic emigrants in blood of normal and HIV-1-infected individuals before and after effective therapy.

L Zhang, S R Lewin, M Markowitz, H H Lin, E Skulsky, R Karanicolas, Y He, X Jin, S Tuttleton, M Vesanen and 9 more

Abstract read
In one paragraph

Article in The Journal of experimental medicine, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed.

  1. Trial
  2. Trial
  3. Increased peripheral expansion of naive CD4+ T cells in vivo after IL-2 treatment of patients with HIV infection.Proceedings of the National Academy of Sciences of the United States of America · 2002
    Trial
  4. Article
  5. Review
  6. Review
  7. Article
  8. HIV infection.Nature reviews. Disease primers · 2023
    Review
  9. Article
  10. Review
  11. Review
  12. Allogeneic and xenogeneic lymphoid reconstitution in aFrontiers in veterinary science · 2022
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

L ZhangAaron Diamond AIDS Research Center, The Rockefeller University, New York, New York 10016, USA.
S R Lewin
M Markowitz
H H Lin
E Skulsky
R Karanicolas
Y He
X Jin
S Tuttleton
M Vesanen
H Spiegel
R Kost
J van Lunzen
H J Stellbrink
S Wolinsky
W Borkowsky
P Palumbo
L G Kostrikis
D D Ho

Funding

WOUND HEALING IN INDIVIDUALS OF DIFFERENT AGE AND GENETIC BACKGROUNDM01RR000102 · NCRR · ROCKEFELLER UNIVERSITY · PI COLLER, BARRY · 1985 to 2006
$32.8M
VIRAL AND IMMUNE CONSEQUENCES OF EARLY HIV1 THERAPYU01AI041534 · NIAID · AARON DIAMOND AIDS RESEARCH CENTER · PI MARKOWITZ, MARTIN H · 1997 to 2006
$10.1M
CORE--VIROLOGYP30AI042848 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HO, DAVID D · 1998 to 2002
$4.3M
HIV1/SIV DYNAMICS AND LYMPHOCYTE TURNOVERR01AI040387 · NIAID · AARON DIAMOND AIDS RESEARCH CENTER · PI HO, DAVID D · 1996 to 2000
$519k
IMPLICATIONS OF CORECEPTOR POLYMORPHISMS IN HIV DISEASER01AI043868 · NIAID · AARON DIAMOND AIDS RESEARCH CENTER · PI KOSTRIKIS, LEONDIOS G · 1998 to 2000
$278k
NCRR NIH HHS M01 RR000102NIAID NIH HHS AI40387NIAID NIH HHS AI41534NIAID NIH HHS AI43868NIAID NIH HHS P30 AI042848NIAID NIH HHS U01 AI041534
6 · The paper itself

Abstract

The role of the thymus in HIV-1 pathogenesis remains unclear. We developed an assay to quantify the number of recent thymic emigrants in blood based on the detection of a major excisional DNA byproduct (termed alpha1 circle) of T cell receptor rearrangement. By studying 532 normal individuals, we found that alpha1 circle numbers in blood remain high for the first 10-15 yr of life, a sharp drop is seen in the late teen years, and a gradual decline occurs thereafter. Compared with age-matched uninfected control individuals, alpha1 circle numbers in HIV-1-infected adults were significantly reduced; however, there were many individuals with normal alpha1 circle numbers. In 74 individuals receiving highly active antiretroviral therapy, we found no appreciable effect on alpha1 circle numbers in those whose baseline values were already within the normal range, but significant increases were observed in those with a preexisting impairment. The increases in alpha1 circle numbers were, however, numerically insufficient to account for the rise in levels of naive T lymphocytes. Overall, it is difficult to invoke thymic regenerative failure as a generalized mechanism for CD4 lymphocyte depletion in HIV-1 infection, as alpha1 circle numbers are normal in a substantial subset of HIV-1-infected individuals.

Indexed as

HIV-1AdolescentAdultAgingAnti-HIV AgentsBase SequenceCase-Control StudiesCell MovementChildDNA, CircularDNA PrimersGene Rearrangement, T-LymphocyteHIV InfectionsHumansPolymerase Chain ReactionT-LymphocytesAnti-HIV AgentsDNA, CircularDNA Primers

Identifiers

PMID10477556
PMCPMC2195623

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.