Evidence map›Paper›PMID 10464203›Full record

ArticleJournal of bacteriology1999

The 17-gene ethanolamine (eut) operon of Salmonella typhimurium encodes five homologues of carboxysome shell proteins.

E Kofoid, C Rappleye, I Stojiljkovic, J Roth

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 161 papers.

0numbers the graph read from it
0cells of the map it votes in
161citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

161 citing papers in PubMed, 278 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Electrochemical cofactor recycling of bacterial microcompartments.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. IntegrativemSystems · 2024
    Article
  9. Electrochemical cofactor recycling of bacterial microcompartments.bioRxiv : the preprint server for biology · 2024
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Antioxidant and antibacterial activity ofFrontiers in nutrition · 2023
    Article
  17. Article
  18. Article
  19. Review
  20. Review

101 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

E KofoidDepartment of Biology, University of Utah, Salt Lake City, Utah 84112, USA.
C Rappleye
I Stojiljkovic
J Roth
University of Utah · US

Funding

BIOSYNTHESIS OF VITAMIN B12 AND ANAEROBIC METABOLISMR01GM034804 · NIGMS · UNIVERSITY OF UTAH · PI ROTH, JOHN R · 1985 to 2004
$1.3M
NIGMS NIH HHS GM34804NIGMS NIH HHS R01 GM034804
6 · The paper itself

Abstract

The eut operon of Salmonella typhimurium encodes proteins involved in the cobalamin-dependent degradation of ethanolamine. Previous genetic analysis revealed six eut genes that are needed for aerobic use of ethanolamine; one (eutR), encodes a positive regulator which mediates induction of the operon by vitamin B12 plus ethanolamine. The DNA sequence of the eut operon included 17 genes, suggesting a more complex pathway than that revealed genetically. We have correlated an open reading frame in the sequence with each of the previously identified genes. Nonpolar insertion and deletion mutations made with the Tn10-derived transposable element T-POP showed that at least 10 of the 11 previously undetected eut genes have no Eut phenotype under the conditions tested. Of the dispensable eut genes, five encode apparent homologues of proteins that serve (in other organisms) as shell proteins of the carboxysome. This bacterial organelle, found in photosynthetic and sulfur-oxidizing bacteria, may contribute to CO2 fixation by concentrating CO2 and excluding oxygen. The presence of these homologues in the eut operon of Salmonella suggests that CO2 fixation may be a feature of ethanolamine catabolism in Salmonella.

Indexed as

Bacterial ProteinsGenes, BacterialMultigene FamilyOperonTranscription FactorsAerobiosisAlcohol DehydrogenaseAldehyde DehydrogenaseAmino Acid SequenceAraC Transcription FactorBase SequenceChaperoninsDNA, BacterialEscherichia coliEscherichia coli ProteinsEthanolamineAlcohol DehydrogenaseAldehyde DehydrogenaseAraC protein, E coliAraC Transcription FactorBacterial ProteinsChaperoninsDNA, BacterialEscherichia coli ProteinsEthanolamineEthanolamine Ammonia-LyaseMembrane ProteinsRepressor ProteinsTranscription Factors

Identifiers

PMID10464203
PMCPMC94038
OpenAlexW2158021267

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.