Evidence map›Paper›PMID 10464195›Full record

ArticleJournal of bacteriology1999

Suppression of nonsense mutations induced by expression of an RNA complementary to a conserved segment of 23S rRNA.

N S Chernyaeva, E J Murgola, A S Mankin

Abstract read
In one paragraph

Article in Journal of bacteriology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

N S ChernyaevaCenter for Pharmaceutical Biotechnology, The University of Illinois, Chicago, Illinois 60607, USA.
E J Murgola
A S Mankin

Funding

TRANSLATIONAL SUPPRESSION AND CODON RECOGNITIONR01GM021499 · NIGMS · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI MURGOLA, EMANUEL J · 1985 to 2004
$1.6M
NIGMS NIH HHS GM21499NIGMS NIH HHS R01 GM021499
6 · The paper itself

Abstract

We identified a short RNA fragment, complementary to the Escherichia coli 23S rRNA segment comprising nucleotides 735 to 766 (in domain II), which when expressed in vivo results in the suppression of UGA nonsense mutations in two reporter genes. Neither UAA nor UAG mutations, examined at the same codon positions, were suppressed by the expression of this antisense rRNA fragment. Our results suggest that a stable phylogenetically conserved hairpin at nucleotides 736 to 760 in 23S rRNA, which is situated close to the peptidyl transferase center, may participate in one or more specific interactions during peptide chain termination.

Indexed as

Conserved SequenceMutationRNA, BacterialRNA, Ribosomal, 23SBase SequenceChloramphenicol O-AcetyltransferaseCodon, TerminatorEscherichia coliMolecular Sequence DataNucleic Acid ConformationSuppression, GeneticChloramphenicol O-AcetyltransferaseCodon, TerminatorRNA, BacterialRNA, Ribosomal, 23S

Identifiers

PMID10464195
PMCPMC94030

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.