Evidence map›Paper›PMID 10464192›Full record

ArticleJournal of bacteriology1999

Analysis of BvgA activation of the pertactin gene promoter in Bordetella pertussis.

S M Kinnear, P E Boucher, S Stibitz, N H Carbonetti

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 47 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

S M KinnearDepartment of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.
P E Boucher
S Stibitz
N H Carbonetti
Center for Biologics Evaluation and Research · USUniversity of Maryland, Baltimore · US

Funding

BORDETELLA PERTUSSIS VIRULENCE FACTOR GENE REGULATIONR29AI032946 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI CARBONETTI, NICHOLAS H. · 1992 to 1996
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NIAID NIH HHS AI32946
6 · The paper itself

Abstract

Bordetella pertussis, the causative agent of whooping cough, regulates expression of its virulence factors via a two-component signal transduction system encoded by the bvg regulatory locus. It has been shown by activation kinetics that several of the virulence factors are differentially regulated. fha is transcribed at 10 min following an inducing signal, while ptx is not transcribed until 2 to 4 h after the inducing signal. We present data indicating that prn is transcribed at 1 h, an intermediate time compared to those of fha and ptx. We have identified cis-acting sequences necessary for expression of prn in B. pertussis by using prn-lac fusions containing alterations in the sequence upstream of the prn open reading frame. In vitro transcription and DNase I footprinting analyses provided evidence to support our hypothesis that BvgA binds to this sequence upstream of prn to activate transcription from the promoter. Our genetic data indicate that the region critical for prn activation extends upstream to position -84. However, these data do not support the location of the prn transcription start site as previously published. We used a number of methods, including prn-lac fusions, reverse transcriptase PCR, and 5' rapid amplification of cDNA ends, to localize and identify the bvg-dependent 5' end of the prn transcript to the cytosine at -125 with respect to the published start site.

Indexed as

Gene Expression Regulation, BacterialPromoter Regions, GeneticVirulence Factors, BordetellaBacterial Outer Membrane ProteinsBacterial ProteinsBase SequenceBinding SitesBordetella pertussisDNA, BacterialGenes, BacterialKineticsMolecular Sequence DataTranscriptional ActivationTranscription FactorsBacterial Outer Membrane ProteinsBacterial ProteinsBvgA protein, BacteriaDNA, BacterialpertactinTranscription FactorsVirulence Factors, Bordetella

Identifiers

PMID10464192
PMCPMC94027
OpenAlexW2115638899

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.