ArticleChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology1999
AFLPs represent highly repetitive sequences in Asparagus officinalis L.
Article in Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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Who cites it
11 citing papers in PubMed.
- Development and applications of a collection of single copy gene-based cytogenetic DNA markers in garden asparagus.Frontiers in plant science · 2022Article
- Article
- Integration of Genetic and Cytogenetic Maps and Identification of Sex Chromosome in Garden Asparagus (Frontiers in plant science · 2018Article
- Genetic and physical maps around the sex-determining M-locus of the dioecious plant asparagus.Molecular genetics and genomics : MGG · 2007Article
- Comparative sequence and genetic analyses of asparagus BACs reveal no microsynteny with onion or rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006Article
- Article
- The effects of nuclear DNA content (C-value) on the quality and utility of AFLP fingerprints.Annals of botany · 2005Article
- Characterization of AFLP sequences from regions of maize B chromosome defined by 12 B-10L translocations.Genetics · 2005Article
- A bacterial artificial chromosome (BAC) library of sugar beet and a physical map of the region encompassing the bolting gene B.Molecular genetics and genomics : MGG · 2003Article
- Article
- Randomly Amplified DNA Fingerprinting: A Culmination of DNA Marker Technologies Based on Arbitrarily-Primed PCR Amplification.Journal of biomedicine & biotechnology · 2002Article
Corrections and comments
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Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The chromosomal and genomic organization of 5 cloned AFLP fragments in asparagus (Asparagus officinalis L.) were investigated. Two of the 5 AFLP loci were sex-linked. The fragments, amplified with EcoRI/Mse I primers, ranged from 107 to 267 bp and were AT-rich. Southern hybridization gave interspersed, middle repetitive to high copy sequence signals. Fluorescence in-situ hybridization (FISH) exhibited hybridization signals on all chromosomes with dispersed distribution pattern and varying signal intensities. Repetitive signals in the form of clusters were observed on all chromosomes. In addition, the 5S rRNA gene was physically mapped on one pair of chromosomes and the 18S-5.8S-25S rRNA genes on three pairs. The results of the FISH and Southern analyses showed that the AFLP marker technology relies on repetitive sequences. Since repetitive DNA sequences represent a fraction of the plant genome undergoing rapid changes during the course of evolution, the question of whether such molecular markers originating from repetitive DNA sequences remain stable is discussed.
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