Evidence map›Paper›PMID 10454589›Full record

ArticleMolecular and cellular biology1999

Trithorax and ASH1 interact directly and associate with the trithorax group-responsive bxd region of the Ultrabithorax promoter.

T Rozovskaia, S Tillib, S Smith, Y Sedkov, O Rozenblatt-Rosen, S Petruk, T Yano, T Nakamura, L Ben-Simchon, J Gildea and 4 more

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 75 citations in OpenAlex.

  1. Pooled it
  2. TRITHORAX-dependent arginine methylation of HSP68 mediates circadian repression by PERIOD in the monarch butterfly.Proceedings of the National Academy of Sciences of the United States of America · 2022
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  17. Histone demethylases and cancer.Advances in cancer research · 2009
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

T RozovskaiaDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
S Tillib
S Smith
Y Sedkov
O Rozenblatt-Rosen
S Petruk
T Yano
T Nakamura
L Ben-Simchon
J Gildea
C M Croce
A Shearn
E Canaani
A Mazo
Thomas Jefferson University · USWeizmann Institute of Science · ILJohns Hopkins University · US

Funding

THE MURINE ALL-1 GENE--TUMORIGENESIS AND DEVELOPMENTP01CA050507 · NCI · THOMAS JEFFERSON UNIVERSITY · PI CROCE, CARLO M · 1994 to 2004
$5.6M
SPECIFIC GENES IN IMAGINAL DISC DETERMINATIONR01GM053058 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI SHEARN, ALLEN D · 1995 to 2004
$1.1M
NCI NIH HHS CA 50507-05NCI NIH HHS P01 CA050507NIGMS NIH HHS GM 53058NIGMS NIH HHS R01 GM053058
6 · The paper itself

Abstract

Trithorax (TRX) and ASH1 belong to the trithorax group (trxG) of transcriptional activator proteins, which maintains homeotic gene expression during Drosophila development. TRX and ASH1 are localized on chromosomes and share several homologous domains with other chromatin-associated proteins, including a highly conserved SET domain and PHD fingers. Based on genetic interactions between trx and ash1 and our previous observation that association of the TRX protein with polytene chromosomes is ash1 dependent, we investigated the possibility of a physical linkage between the two proteins. We found that the endogenous TRX and ASH1 proteins coimmunoprecipitate from embryonic extracts and colocalize on salivary gland polytene chromosomes. Furthermore, we demonstrated that TRX and ASH1 bind in vivo to a relatively small (4 kb) bxd subregion of the homeotic gene Ultrabithorax (Ubx), which contains several trx response elements. Analysis of the effects of ash1 mutations on the activity of this regulatory region indicates that it also contains ash1 response element(s). This suggests that ASH1 and TRX act on Ubx in relatively close proximity to each other. Finally, TRX and ASH1 appear to interact directly through their conserved SET domains, based on binding assays in vitro and in yeast and on coimmunoprecipitation assays with embryo extracts. Collectively, these results suggest that TRX and ASH1 are components that interact either within trxG protein complexes or between complexes that act in close proximity on regulatory DNA to maintain Ubx transcription.

Indexed as

Drosophila ProteinsGenes, InsectAmino Acid SequenceAnimalsBasic Helix-Loop-Helix ProteinsDNA-Binding ProteinsDrosophilaGenes, HomeoboxHomeodomain ProteinsIn Situ Hybridization, FluorescenceMacromolecular SubstancesMolecular Sequence DataPoint MutationPromoter Regions, GeneticProtein BindingSaccharomyces cerevisiaeac protein, DrosophilaBasic Helix-Loop-Helix ProteinsDNA-Binding ProteinsDrosophila ProteinsHomeodomain ProteinsMacromolecular SubstancesTranscription FactorsTrl protein, DrosophilaUbx protein, Drosophila

Identifiers

PMID10454589
PMCPMC84613
OpenAlexW2118281253

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.