Evidence map›Paper›PMID 10454572›Full record

ArticleMolecular and cellular biology1999

Involvement of DNA end-binding protein Ku in Ty element retrotransposition.

J A Downs, S P Jackson

Abstract read
In one paragraph

Article in Molecular and cellular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Transposable elements and G-quadruplexes.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2015
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Survey of repetitive sequences in Silene latifolia with respect to their distribution on sex chromosomes.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2008
    Article
  13. Article
  14. A tensor higher-order singular value decomposition for integrative analysis of DNA microarray data from different studies.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
  15. Article
  16. Review
  17. Article
  18. Positive selection of yeast nonhomologous end-joining genes and a retrotransposon conflict hypothesis.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  19. DNA damage and L1 retrotransposition.Journal of biomedicine & biotechnology · 2006
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

J A DownsWellcome/CRC Institute and Department of Zoology, Cambridge University, Cambridge CB2 1QR, United Kingdom.
S P Jackson

Funding

Wellcome Trust
6 · The paper itself

Abstract

Saccharomyces cerevisiae Ty elements are retrotransposons whose life cycles are strikingly similar to those of retroviruses. They transpose via an RNA intermediate that is converted to linear double-stranded cDNA and then inserted into the host genome. Although Ty integration is mediated by the element-encoded integrase, it has been proposed that host factors are involved in this process. Here, we show that the DNA end-binding protein Ku, which functions in DNA double-strand break repair, potentiates retrotransposition. Specifically, by using a galactose-inducible Ty1 system, we found that in vivo, Ty1 retrotransposition rates were substantially reduced in the absence of Ku. In contrast, this phenotype was not observed with yeast strains containing mutations in other genes that are involved in DNA repair. We present evidence that Ku associates with Ty1 viruslike particles both in vitro and in vivo. These results provide an additional role for Ku and suggest that it might function in the life cycles of retroelements in other systems.

Indexed as

Antigens, NuclearDNA HelicasesSaccharomyces cerevisiae ProteinsBase SequenceDNA-Binding ProteinsDNA PrimersDNA RepairFungal ProteinsInclusion Bodies, ViralKu AutoantigenMutationNuclear ProteinsPhenotypeRecombination, GeneticRetroelementsSaccharomyces cerevisiaeAntigens, NuclearDNA-Binding ProteinsDNA HelicasesDNA PrimersFungal Proteinshigh affinity DNA-binding factor, S cerevisiaeKu AutoantigenNuclear ProteinsRetroelementsSaccharomyces cerevisiae ProteinsXRCC5 protein, humanXrcc6 protein, human

Identifiers

PMID10454572
PMCPMC84583

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.