Evidence map›Paper›PMID 10454543›Full record

ArticleMolecular and cellular biology1999

Tat-SF1 protein associates with RAP30 and human SPT5 proteins.

J B Kim, Y Yamaguchi, T Wada, H Handa, P A Sharp

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 52 citations in OpenAlex.

  1. Review
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  6. Structural Elements Recognized by Abacavir-Induced T Cells.International journal of molecular sciences · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

J B KimCenter for Cancer Research, Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.
Y Yamaguchi
T Wada
H Handa
P A Sharp
Tokyo Institute of Technology · JPCenter for Cancer Research · US

Funding

VIRUS PRODUCTION COREP30CA014051 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI MATTHEW G. VANDER HEIDEN · 1985 to 2026
$93.9M
USE OF RETROVIRUS PROMOTER TRAP VECTORS TO IDENTIFY ONCOGENES AND ANTI-ONCOGENESP01CA042063 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI JACKS, TYLER E. · 1986 to 2021
$30.5M
MECHANISM OF ACTIVITIES OF TAT AND REV OF HIV1R01AI032486 · NIAID · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SHARP, PHILLIP A · 1992 to 2001
$679k
NCI NIH HHS P01 CA042063NCI NIH HHS P01-CA42063NCI NIH HHS P30 CA014051NCI NIH HHS P30-CA 14051NIAID NIH HHS R01-AI32486
6 · The paper itself

Abstract

The potent transactivator Tat recognizes the transactivation response RNA element (TAR) of human immunodeficiency virus type 1 and stimulates the processivity of elongation of RNA polymerase (Pol) II complexes. The cellular proteins Tat-SF1 and human SPT5 (hSPT5) are required for Tat activation as shown by immunodepletion with specific sera and complementation with recombinant proteins. In nuclear extracts, small fractions of both hSPT5 and Pol II are associated with Tat-SF1 protein. Surprisingly, the RAP30 protein of the heterodimeric transcription TFIIF factor is associated with Tat-SF1, while the RAP74 subunit of TFIIF is not coimmunoprecipitated with Tat-SF1. Overexpression of Tat-SF1 and hSPT5 specifically stimulates the transcriptional activity of Tat in vivo. These results suggest that Tat-SF1 and hSPT5 are indispensable cellular factors supporting Tat-specific transcription activation and that they may interact with RAP30 in controlling elongation.

Indexed as

Chromosomal Proteins, Non-HistoneTranscriptional Elongation FactorsTranscription Factors, TFIIDNA Polymerase IIFungal ProteinsHeLa CellsHIV-1HumansNuclear ProteinsRecombinant ProteinsTrans-ActivatorsTranscriptional ActivationTranscription FactorsChromosomal Proteins, Non-HistoneDNA Polymerase IIFungal ProteinsHTATSF1 protein, humanNuclear ProteinsRecombinant ProteinsSPT5 transcriptional elongation factorTrans-ActivatorsTranscriptional Elongation FactorsTranscription FactorsTranscription Factors, TFIItranscription factor TFIIF

Identifiers

PMID10454543
PMCPMC84462
OpenAlexW2171500220

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.