Evidence map›Paper›PMID 10449721›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1999

Selection for improved subtiligases by phage display.

S Atwell, J A Wells

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Phage-Enabled Nanomedicine: From Probes to Therapeutics in Precision Medicine.Angewandte Chemie (International ed. in English) · 2017
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Inflammatory stimuli regulate caspase substrate profiles.Molecular & cellular proteomics : MCP · 2010
    Article
  13. Sampling the N-terminal proteome of human blood.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  14. Article
  15. De novo designed cyclic-peptide heme complexes.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
  16. Article
  17. Article
  18. Chemical complementation: a reaction-independent genetic assay for enzyme catalysis.Proceedings of the National Academy of Sciences of the United States of America · 2002
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

S AtwellDepartment of Protein Engineering, Genentech, Inc., 1 DNA Way, South San Francisco, CA 94080, USA.
J A Wells

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Engineering enzyme activity has been challenging because of uncertainties in structure-function relationships and difficulties in screening a large number of mutant enzymes. A product capture strategy using phage display is presented here for the selection of improved enzymes from a large library of variants (>10(9) independently derived mutants). Subtiligase, a double mutant of subtilisin BPN' that catalyzes the ligation of peptides, was displayed on phage. Twenty-five active site residues were randomly mutated in groups of four or five to yield six different libraries that were independently sorted. Variants that ligated a biotin peptide onto their own extended N termini were selectively captured. Mutant subtiligases were identified that had increased ligase activity. The selection also yielded unexpected subtiligase mutants having residues known to improve the stability and oxidative resistance of wild-type subtilisin. These studies are exemplary for the use of phage to improve enzyme function when it is closely linked to a selectable catalytic event.

Indexed as

BacteriophagesBinding SitesBiotinCatalytic DomainChromatography, High Pressure LiquidKineticsModels, MolecularMutagenesis, Site-DirectedPeptide SynthasesProtein EngineeringStructure-Activity RelationshipSubtilisinsBiotinPeptide SynthasessubtiligaseSubtilisins

Identifiers

PMID10449721
PMCPMC22237

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.