Evidence map›Paper›PMID 10449588›Full record

ArticleThe Plant cell1999

Polyadenylation occurs at multiple sites in maize mitochondrial cox2 mRNA and is independent of editing status.

D S Lupold, A G Caoile, D B Stern

Open access · greenAbstract readComparative Study
In one paragraph

Article in The Plant cell, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Article
  3. RNA polyadenylation and its consequences in prokaryotes.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Review
  4. Article
  5. Post-transcriptional control of chloroplast gene expression.Gene regulation and systems biology · 2009
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

D S LupoldSection of Genetics and Development, Cornell University, Ithaca, NY 14853, USA.
A G Caoile
D B Stern
Cornell University · US

Funding

IN VITRO ANALYSIS OF PLANT MITOCHONDRIAL TRANSCRIPTIONR01GM052560 · NIGMS · BOYCE THOMPSON INST FOR PLANT RESEARCH · PI STERN, DAVID B · 1995 to 1997
–
NIGMS NIH HHS R01GM52560
6 · The paper itself

Abstract

Polyadenylation of nucleus-encoded transcripts has a well-defined role in gene expression. The extent and function of polyadenylation in organelles and prokaryotic systems, however, are less well documented. Recent reports of polyadenylation-mediated RNA destabilization in Escherichia coli and in vascular plant chloroplasts prompted us to look for polyadenylation in plant mitochondria. Here, we report the use of reverse transcription-polymerase chain reaction to map multiple polyadenylate addition sites in maize mitochondrial cox2 transcripts. The lack of sequence conservation surrounding these sites suggests that polyadenylation may occur at many 3' termini created by endoribonucleolytic and/or exoribonucleolytic activities, including those activities involved in 3' end maturation. Endogenous transcripts could be efficiently polyadenylated in vitro by using maize mitochondrial lysates with an activity that added AMP more efficiently than GMP. Polyadenylated substrates were tested for stability in maize mitochondrial S100 extracts, and we found that, compared with nonpolyadenylated RNAs, the polyadenylated substrates were less stable. Taken together with the low abundance of polyadenylated RNAs in maize mitochondria, our results are consistent with a degradation-related process. The fact that polyadenylation does not dramatically destabilize plant mitochondrial transcripts, at least in vitro, is in agreement with results obtained for animal mitochondria but differs from those obtained for chloroplasts and E. coli. Because fully edited, partially edited, and unedited transcripts were found among the cloned polyadenylated cox2 cDNAs, we conclude that RNA editing and polyadenylation are independent processes in maize mitochondria.

Indexed as

RNA Processing, Post-TranscriptionalAdenosine MonophosphateBase SequenceConserved SequenceElectron Transport Complex IVMitochondriaMolecular Sequence DataPlant ProteinsPoly ARNA EditingRNA, MessengerRNA, PlantZea maysAdenosine Monophosphatecox2 protein, Glycine sojaElectron Transport Complex IVPlant ProteinsPoly ARNA, MessengerRNA, Plant

Identifiers

PMID10449588
PMCPMC144286
OpenAlexW2111932162

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.